Gene : Medtr7g118330 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12802:SF43 - PROTEIN CCA1-RELATED Description:  late elongated hypocotyl-like protein
Genomic Order:  6205 Name:  ? Medtr7g118330
Secondary Identifier:  ? PAC:31081210
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g118330 0.5kb upstream 0.5kb upstream 8707 true chr7: 49115128-49123834 Medicago truncatula
Medtr7g118330 0.5kb upstream 0.5kb upstream 500 false chr7: 49115128-49115627 Medicago truncatula
Medtr7g118330 0.5kb downstream 0.5kb downstream 8707 true chr7: 49115628-49124334 Medicago truncatula
Medtr7g118330 0.5kb downstream 0.5kb downstream 500 false chr7: 49123835-49124334 Medicago truncatula
Medtr7g118330 1.0kb upstream 1.0kb upstream 9207 true chr7: 49114628-49123834 Medicago truncatula
Medtr7g118330 1.0kb upstream 1.0kb upstream 1000 false chr7: 49114628-49115627 Medicago truncatula
Medtr7g118330 1.0kb downstream 1.0kb downstream 9207 true chr7: 49115628-49124834 Medicago truncatula
Medtr7g118330 1.0kb downstream 1.0kb downstream 1000 false chr7: 49123835-49124834 Medicago truncatula
Medtr7g118330 2.0kb upstream 2.0kb upstream 10207 true chr7: 49113628-49123834 Medicago truncatula
Medtr7g118330 2.0kb upstream 2.0kb upstream 2000 false chr7: 49113628-49115627 Medicago truncatula
Medtr7g118330 2.0kb downstream 2.0kb downstream 10207 true chr7: 49115628-49125834 Medicago truncatula
Medtr7g118330 2.0kb downstream 2.0kb downstream 2000 false chr7: 49123835-49125834 Medicago truncatula
Medtr7g118330 5.0kb upstream 5.0kb upstream 13207 true chr7: 49110628-49123834 Medicago truncatula
Medtr7g118330 5.0kb upstream 5.0kb upstream 5000 false chr7: 49110628-49115627 Medicago truncatula
Medtr7g118330 5.0kb downstream 5.0kb downstream 13207 true chr7: 49115628-49128834 Medicago truncatula
Medtr7g118330 5.0kb downstream 5.0kb downstream 5000 false chr7: 49123835-49128834 Medicago truncatula
Medtr7g118330 10.0kb upstream 10.0kb upstream 18207 true chr7: 49105628-49123834 Medicago truncatula
Medtr7g118330 10.0kb upstream 10.0kb upstream 10000 false chr7: 49105628-49115627 Medicago truncatula
Medtr7g118330 10.0kb downstream 10.0kb downstream 18207 true chr7: 49115628-49133834 Medicago truncatula
Medtr7g118330 10.0kb downstream 10.0kb downstream 10000 false chr7: 49123835-49133834 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311594 5265 Fabidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.504        
cufflinks 32.745     High High
cufflinks 7.017        
cufflinks 0.201       Low
cufflinks 11.634     High  
cufflinks 0.251       Low
cufflinks 1.158        
cufflinks 17.515     High  
cufflinks 2.881        

0 Strain