Gene : Medtr8g074790 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0114//KOG0121 - Predicted RNA-binding protein (RRM superfamily) // Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) Description:  RNA recognition motif, a.k.a. RRM, RBD protein
Genomic Order:  3821 Name:  ? Medtr8g074790
Secondary Identifier:  ? PAC:31074350
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g074790 0.5kb upstream 0.5kb upstream 3867   true chr8: 31619760-31623626 Medicago truncatula
Medtr8g074790 0.5kb upstream 0.5kb upstream 500   false chr8: 31619760-31620259 Medicago truncatula
Medtr8g074790 0.5kb downstream 0.5kb downstream 3867   true chr8: 31620260-31624126 Medicago truncatula
Medtr8g074790 0.5kb downstream 0.5kb downstream 500   false chr8: 31623627-31624126 Medicago truncatula
Medtr8g074790 1.0kb upstream 1.0kb upstream 4367   true chr8: 31619260-31623626 Medicago truncatula
Medtr8g074790 1.0kb upstream 1.0kb upstream 1000   false chr8: 31619260-31620259 Medicago truncatula
Medtr8g074790 1.0kb downstream 1.0kb downstream 4367   true chr8: 31620260-31624626 Medicago truncatula
Medtr8g074790 1.0kb downstream 1.0kb downstream 1000   false chr8: 31623627-31624626 Medicago truncatula
Medtr8g074790 2.0kb upstream 2.0kb upstream 5367   true chr8: 31618260-31623626 Medicago truncatula
Medtr8g074790 2.0kb upstream 2.0kb upstream 2000   false chr8: 31618260-31620259 Medicago truncatula
Medtr8g074790 2.0kb downstream 2.0kb downstream 5367   true chr8: 31620260-31625626 Medicago truncatula
Medtr8g074790 2.0kb downstream 2.0kb downstream 2000   false chr8: 31623627-31625626 Medicago truncatula
Medtr8g074790 5.0kb upstream 5.0kb upstream 8367   true chr8: 31615260-31623626 Medicago truncatula
Medtr8g074790 5.0kb upstream 5.0kb upstream 5000   false chr8: 31615260-31620259 Medicago truncatula
Medtr8g074790 5.0kb downstream 5.0kb downstream 8367   true chr8: 31620260-31628626 Medicago truncatula
Medtr8g074790 5.0kb downstream 5.0kb downstream 5000   false chr8: 31623627-31628626 Medicago truncatula
Medtr8g074790 10.0kb upstream 10.0kb upstream 13367   true chr8: 31610260-31623626 Medicago truncatula
Medtr8g074790 10.0kb upstream 10.0kb upstream 10000   false chr8: 31610260-31620259 Medicago truncatula
Medtr8g074790 10.0kb downstream 10.0kb downstream 13367   true chr8: 31620260-31633626 Medicago truncatula
Medtr8g074790 10.0kb downstream 10.0kb downstream 10000   false chr8: 31623627-31633626 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309837 5265 Fabidae View MSA
124070278 5270 Rosid View MSA
123749009 5271 Pentapetalae View MSA
122794925 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.318       Low
cufflinks 7.198        
cufflinks 7.908        
cufflinks 17.462     High High
cufflinks 7.899        
cufflinks 24.898     High High
cufflinks 7.161        
cufflinks 7.214        
cufflinks 8.545        

0 Strain