Gene : Medtr8g461860 M. truncatula Mt4.0v1
Description:  Ty3/Gypsy polyprotein/retrotransposon, putative Genomic Order:  2643
Name:  ? Medtr8g461860 Secondary Identifier:  ? PAC:31075174
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g461860 0.5kb upstream 0.5kb upstream 878   true chr8: 21968220-21969097 Medicago truncatula
Medtr8g461860 0.5kb upstream 0.5kb upstream 500   false chr8: 21968220-21968719 Medicago truncatula
Medtr8g461860 0.5kb downstream 0.5kb downstream 878   true chr8: 21968720-21969597 Medicago truncatula
Medtr8g461860 0.5kb downstream 0.5kb downstream 500   false chr8: 21969098-21969597 Medicago truncatula
Medtr8g461860 1.0kb upstream 1.0kb upstream 1378   true chr8: 21967720-21969097 Medicago truncatula
Medtr8g461860 1.0kb upstream 1.0kb upstream 1000   false chr8: 21967720-21968719 Medicago truncatula
Medtr8g461860 1.0kb downstream 1.0kb downstream 1378   true chr8: 21968720-21970097 Medicago truncatula
Medtr8g461860 1.0kb downstream 1.0kb downstream 1000   false chr8: 21969098-21970097 Medicago truncatula
Medtr8g461860 2.0kb upstream 2.0kb upstream 2378   true chr8: 21966720-21969097 Medicago truncatula
Medtr8g461860 2.0kb upstream 2.0kb upstream 2000   false chr8: 21966720-21968719 Medicago truncatula
Medtr8g461860 2.0kb downstream 2.0kb downstream 2378   true chr8: 21968720-21971097 Medicago truncatula
Medtr8g461860 2.0kb downstream 2.0kb downstream 2000   false chr8: 21969098-21971097 Medicago truncatula
Medtr8g461860 5.0kb upstream 5.0kb upstream 5378   true chr8: 21963720-21969097 Medicago truncatula
Medtr8g461860 5.0kb upstream 5.0kb upstream 5000   false chr8: 21963720-21968719 Medicago truncatula
Medtr8g461860 5.0kb downstream 5.0kb downstream 5378   true chr8: 21968720-21974097 Medicago truncatula
Medtr8g461860 5.0kb downstream 5.0kb downstream 5000   false chr8: 21969098-21974097 Medicago truncatula
Medtr8g461860 10.0kb upstream 10.0kb upstream 10378   true chr8: 21958720-21969097 Medicago truncatula
Medtr8g461860 10.0kb upstream 10.0kb upstream 10000   false chr8: 21958720-21968719 Medicago truncatula
Medtr8g461860 10.0kb downstream 10.0kb downstream 10378   true chr8: 21968720-21979097 Medicago truncatula
Medtr8g461860 10.0kb downstream 10.0kb downstream 10000   false chr8: 21969098-21979097 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315059 5265 Fabidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain