Gene : Medtr0123s0070 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12802:SF49 - PROTEIN REVEILLE 3-RELATED Description:  myb transcription factor
Genomic Order:  4 Name:  ? Medtr0123s0070
Secondary Identifier:  ? PAC:31069331
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0123s0070 0.5kb upstream 0.5kb upstream 8501 true scaffold0123: 37193-45693 Medicago truncatula
Medtr0123s0070 0.5kb upstream 0.5kb upstream 500 false scaffold0123: 45194-45693 Medicago truncatula
Medtr0123s0070 0.5kb downstream 0.5kb downstream 8501 true scaffold0123: 36693-45193 Medicago truncatula
Medtr0123s0070 0.5kb downstream 0.5kb downstream 500 false scaffold0123: 36693-37192 Medicago truncatula
Medtr0123s0070 1.0kb upstream 1.0kb upstream 9001 true scaffold0123: 37193-46193 Medicago truncatula
Medtr0123s0070 1.0kb upstream 1.0kb upstream 1000 false scaffold0123: 45194-46193 Medicago truncatula
Medtr0123s0070 1.0kb downstream 1.0kb downstream 9001 true scaffold0123: 36193-45193 Medicago truncatula
Medtr0123s0070 1.0kb downstream 1.0kb downstream 1000 false scaffold0123: 36193-37192 Medicago truncatula
Medtr0123s0070 2.0kb upstream 2.0kb upstream 9459 true scaffold0123: 37193-46651 Medicago truncatula
Medtr0123s0070 2.0kb upstream 2.0kb upstream 1458 false scaffold0123: 45194-46651 Medicago truncatula
Medtr0123s0070 2.0kb downstream 2.0kb downstream 10001 true scaffold0123: 35193-45193 Medicago truncatula
Medtr0123s0070 2.0kb downstream 2.0kb downstream 2000 false scaffold0123: 35193-37192 Medicago truncatula
Medtr0123s0070 5.0kb upstream 5.0kb upstream 9459 true scaffold0123: 37193-46651 Medicago truncatula
Medtr0123s0070 5.0kb upstream 5.0kb upstream 1458 false scaffold0123: 45194-46651 Medicago truncatula
Medtr0123s0070 5.0kb downstream 5.0kb downstream 13001 true scaffold0123: 32193-45193 Medicago truncatula
Medtr0123s0070 5.0kb downstream 5.0kb downstream 5000 false scaffold0123: 32193-37192 Medicago truncatula
Medtr0123s0070 10.0kb upstream 10.0kb upstream 9459 true scaffold0123: 37193-46651 Medicago truncatula
Medtr0123s0070 10.0kb upstream 10.0kb upstream 1458 false scaffold0123: 45194-46651 Medicago truncatula
Medtr0123s0070 10.0kb downstream 10.0kb downstream 18001 true scaffold0123: 27193-45193 Medicago truncatula
Medtr0123s0070 10.0kb downstream 10.0kb downstream 10000 false scaffold0123: 27193-37192 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298993 5265 Fabidae View MSA
124066393 5270 Rosid View MSA
123747099 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.781        
cufflinks 1.21        
cufflinks 1.142        
cufflinks 0.743        
cufflinks 1.284       High
cufflinks 0.518       Low
cufflinks 0.887        
cufflinks 1.09        
cufflinks 0.836        

0 Strain