Gene : SapurV1A.0617s0010 S. purpurea v1.0
Defline:  (1 of 3) PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Genomic Order:  713
Name:  ? SapurV1A.0617s0010 Secondary Identifier:  ? PAC:31395753
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-695 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0617s0010 0.5kb upstream 0.5kb upstream 2838 true chr11: 10804729-10807566 Salix purpurea
SapurV1A.0617s0010 0.5kb upstream 0.5kb upstream 500 false chr11: 10804729-10805228 Salix purpurea
SapurV1A.0617s0010 0.5kb downstream 0.5kb downstream 2838 true chr11: 10805229-10808066 Salix purpurea
SapurV1A.0617s0010 0.5kb downstream 0.5kb downstream 500 false chr11: 10807567-10808066 Salix purpurea
SapurV1A.0617s0010 1.0kb upstream 1.0kb upstream 3338 true chr11: 10804229-10807566 Salix purpurea
SapurV1A.0617s0010 1.0kb upstream 1.0kb upstream 1000 false chr11: 10804229-10805228 Salix purpurea
SapurV1A.0617s0010 1.0kb downstream 1.0kb downstream 3338 true chr11: 10805229-10808566 Salix purpurea
SapurV1A.0617s0010 1.0kb downstream 1.0kb downstream 1000 false chr11: 10807567-10808566 Salix purpurea
SapurV1A.0617s0010 2.0kb upstream 2.0kb upstream 4338 true chr11: 10803229-10807566 Salix purpurea
SapurV1A.0617s0010 2.0kb upstream 2.0kb upstream 2000 false chr11: 10803229-10805228 Salix purpurea
SapurV1A.0617s0010 2.0kb downstream 2.0kb downstream 4338 true chr11: 10805229-10809566 Salix purpurea
SapurV1A.0617s0010 2.0kb downstream 2.0kb downstream 2000 false chr11: 10807567-10809566 Salix purpurea
SapurV1A.0617s0010 5.0kb upstream 5.0kb upstream 7338 true chr11: 10800229-10807566 Salix purpurea
SapurV1A.0617s0010 5.0kb upstream 5.0kb upstream 5000 false chr11: 10800229-10805228 Salix purpurea
SapurV1A.0617s0010 5.0kb downstream 5.0kb downstream 7338 true chr11: 10805229-10812566 Salix purpurea
SapurV1A.0617s0010 5.0kb downstream 5.0kb downstream 5000 false chr11: 10807567-10812566 Salix purpurea
SapurV1A.0617s0010 10.0kb upstream 10.0kb upstream 12338 true chr11: 10795229-10807566 Salix purpurea
SapurV1A.0617s0010 10.0kb upstream 10.0kb upstream 10000 false chr11: 10795229-10805228 Salix purpurea
SapurV1A.0617s0010 10.0kb downstream 10.0kb downstream 12338 true chr11: 10805229-10817566 Salix purpurea
SapurV1A.0617s0010 10.0kb downstream 10.0kb downstream 10000 false chr11: 10807567-10817566 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461041 5262 Malpighiales View MSA
124250838 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain