Gene : SapurV1A.1404s0010 S. purpurea v1.0
Defline:  (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) Genomic Order:  501
Name:  ? SapurV1A.1404s0010 Secondary Identifier:  ? PAC:31442559
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1404s0010 0.5kb upstream 0.5kb upstream 9658 true chr12: 7345106-7354763 Salix purpurea
SapurV1A.1404s0010 0.5kb upstream 0.5kb upstream 500 false chr12: 7345106-7345605 Salix purpurea
SapurV1A.1404s0010 0.5kb downstream 0.5kb downstream 9658 true chr12: 7345606-7355263 Salix purpurea
SapurV1A.1404s0010 0.5kb downstream 0.5kb downstream 500 false chr12: 7354764-7355263 Salix purpurea
SapurV1A.1404s0010 1.0kb upstream 1.0kb upstream 10158 true chr12: 7344606-7354763 Salix purpurea
SapurV1A.1404s0010 1.0kb upstream 1.0kb upstream 1000 false chr12: 7344606-7345605 Salix purpurea
SapurV1A.1404s0010 1.0kb downstream 1.0kb downstream 10158 true chr12: 7345606-7355763 Salix purpurea
SapurV1A.1404s0010 1.0kb downstream 1.0kb downstream 1000 false chr12: 7354764-7355763 Salix purpurea
SapurV1A.1404s0010 2.0kb upstream 2.0kb upstream 11158 true chr12: 7343606-7354763 Salix purpurea
SapurV1A.1404s0010 2.0kb upstream 2.0kb upstream 2000 false chr12: 7343606-7345605 Salix purpurea
SapurV1A.1404s0010 2.0kb downstream 2.0kb downstream 11158 true chr12: 7345606-7356763 Salix purpurea
SapurV1A.1404s0010 2.0kb downstream 2.0kb downstream 2000 false chr12: 7354764-7356763 Salix purpurea
SapurV1A.1404s0010 5.0kb upstream 5.0kb upstream 14158 true chr12: 7340606-7354763 Salix purpurea
SapurV1A.1404s0010 5.0kb upstream 5.0kb upstream 5000 false chr12: 7340606-7345605 Salix purpurea
SapurV1A.1404s0010 5.0kb downstream 5.0kb downstream 14158 true chr12: 7345606-7359763 Salix purpurea
SapurV1A.1404s0010 5.0kb downstream 5.0kb downstream 5000 false chr12: 7354764-7359763 Salix purpurea
SapurV1A.1404s0010 10.0kb upstream 10.0kb upstream 19158 true chr12: 7335606-7354763 Salix purpurea
SapurV1A.1404s0010 10.0kb upstream 10.0kb upstream 10000 false chr12: 7335606-7345605 Salix purpurea
SapurV1A.1404s0010 10.0kb downstream 10.0kb downstream 19158 true chr12: 7345606-7364763 Salix purpurea
SapurV1A.1404s0010 10.0kb downstream 10.0kb downstream 10000 false chr12: 7354764-7364763 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459942 5262 Malpighiales View MSA
124252694 5268 Malvidae View MSA
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain