Gene : SapurV1A.0693s0030 S. purpurea v1.0

Defline:  (1 of 3) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  118
Name:  ? SapurV1A.0693s0030 Secondary Identifier:  ? PAC:31449282

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0693s0030 0.5kb upstream 0.5kb upstream 12603 true chr17: 1249969-1262571 Salix purpurea
SapurV1A.0693s0030 0.5kb upstream 0.5kb upstream 500 false chr17: 1262072-1262571 Salix purpurea
SapurV1A.0693s0030 0.5kb downstream 0.5kb downstream 12603 true chr17: 1249469-1262071 Salix purpurea
SapurV1A.0693s0030 0.5kb downstream 0.5kb downstream 500 false chr17: 1249469-1249968 Salix purpurea
SapurV1A.0693s0030 1.0kb upstream 1.0kb upstream 13103 true chr17: 1249969-1263071 Salix purpurea
SapurV1A.0693s0030 1.0kb upstream 1.0kb upstream 1000 false chr17: 1262072-1263071 Salix purpurea
SapurV1A.0693s0030 1.0kb downstream 1.0kb downstream 13103 true chr17: 1248969-1262071 Salix purpurea
SapurV1A.0693s0030 1.0kb downstream 1.0kb downstream 1000 false chr17: 1248969-1249968 Salix purpurea
SapurV1A.0693s0030 2.0kb upstream 2.0kb upstream 14103 true chr17: 1249969-1264071 Salix purpurea
SapurV1A.0693s0030 2.0kb upstream 2.0kb upstream 2000 false chr17: 1262072-1264071 Salix purpurea
SapurV1A.0693s0030 2.0kb downstream 2.0kb downstream 14103 true chr17: 1247969-1262071 Salix purpurea
SapurV1A.0693s0030 2.0kb downstream 2.0kb downstream 2000 false chr17: 1247969-1249968 Salix purpurea
SapurV1A.0693s0030 5.0kb upstream 5.0kb upstream 17103 true chr17: 1249969-1267071 Salix purpurea
SapurV1A.0693s0030 5.0kb upstream 5.0kb upstream 5000 false chr17: 1262072-1267071 Salix purpurea
SapurV1A.0693s0030 5.0kb downstream 5.0kb downstream 17103 true chr17: 1244969-1262071 Salix purpurea
SapurV1A.0693s0030 5.0kb downstream 5.0kb downstream 5000 false chr17: 1244969-1249968 Salix purpurea
SapurV1A.0693s0030 10.0kb upstream 10.0kb upstream 22103 true chr17: 1249969-1272071 Salix purpurea
SapurV1A.0693s0030 10.0kb upstream 10.0kb upstream 10000 false chr17: 1262072-1272071 Salix purpurea
SapurV1A.0693s0030 10.0kb downstream 10.0kb downstream 22103 true chr17: 1239969-1262071 Salix purpurea
SapurV1A.0693s0030 10.0kb downstream 10.0kb downstream 10000 false chr17: 1239969-1249968 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413091 5262 Malpighiales View MSA
124244144 5268 Malvidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain