Gene : SapurV1A.0848s0060 S. purpurea v1.0
Defline:  (1 of 3) PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Genomic Order:  6
Name:  ? SapurV1A.0848s0060 Secondary Identifier:  ? PAC:31450345
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-695 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0848s0060 0.5kb upstream 0.5kb upstream 2828 true Scaffold0848: 127571-130398 Salix purpurea
SapurV1A.0848s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold0848: 127571-128070 Salix purpurea
SapurV1A.0848s0060 0.5kb downstream 0.5kb downstream 2828 true Scaffold0848: 128071-130898 Salix purpurea
SapurV1A.0848s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold0848: 130399-130898 Salix purpurea
SapurV1A.0848s0060 1.0kb upstream 1.0kb upstream 3328 true Scaffold0848: 127071-130398 Salix purpurea
SapurV1A.0848s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold0848: 127071-128070 Salix purpurea
SapurV1A.0848s0060 1.0kb downstream 1.0kb downstream 3328 true Scaffold0848: 128071-131398 Salix purpurea
SapurV1A.0848s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold0848: 130399-131398 Salix purpurea
SapurV1A.0848s0060 2.0kb upstream 2.0kb upstream 4328 true Scaffold0848: 126071-130398 Salix purpurea
SapurV1A.0848s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold0848: 126071-128070 Salix purpurea
SapurV1A.0848s0060 2.0kb downstream 2.0kb downstream 4328 true Scaffold0848: 128071-132398 Salix purpurea
SapurV1A.0848s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold0848: 130399-132398 Salix purpurea
SapurV1A.0848s0060 5.0kb upstream 5.0kb upstream 7328 true Scaffold0848: 123071-130398 Salix purpurea
SapurV1A.0848s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold0848: 123071-128070 Salix purpurea
SapurV1A.0848s0060 5.0kb downstream 5.0kb downstream 6188 true Scaffold0848: 128071-134258 Salix purpurea
SapurV1A.0848s0060 5.0kb downstream 5.0kb downstream 3860 false Scaffold0848: 130399-134258 Salix purpurea
SapurV1A.0848s0060 10.0kb upstream 10.0kb upstream 12328 true Scaffold0848: 118071-130398 Salix purpurea
SapurV1A.0848s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold0848: 118071-128070 Salix purpurea
SapurV1A.0848s0060 10.0kb downstream 10.0kb downstream 6188 true Scaffold0848: 128071-134258 Salix purpurea
SapurV1A.0848s0060 10.0kb downstream 10.0kb downstream 3860 false Scaffold0848: 130399-134258 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461041 5262 Malpighiales View MSA
124250838 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain