Gene : SapurV1A.2183s0050 S. purpurea v1.0
Defline:  (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  5
Name:  ? SapurV1A.2183s0050 Secondary Identifier:  ? PAC:31449572
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-1081 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2183s0050 0.5kb upstream 0.5kb upstream 2475 true Scaffold2183: 24729-27203 Salix purpurea
SapurV1A.2183s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold2183: 26704-27203 Salix purpurea
SapurV1A.2183s0050 0.5kb downstream 0.5kb downstream 2475 true Scaffold2183: 24229-26703 Salix purpurea
SapurV1A.2183s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold2183: 24229-24728 Salix purpurea
SapurV1A.2183s0050 1.0kb upstream 1.0kb upstream 2975 true Scaffold2183: 24729-27703 Salix purpurea
SapurV1A.2183s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold2183: 26704-27703 Salix purpurea
SapurV1A.2183s0050 1.0kb downstream 1.0kb downstream 2975 true Scaffold2183: 23729-26703 Salix purpurea
SapurV1A.2183s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold2183: 23729-24728 Salix purpurea
SapurV1A.2183s0050 2.0kb upstream 2.0kb upstream 3975 true Scaffold2183: 24729-28703 Salix purpurea
SapurV1A.2183s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold2183: 26704-28703 Salix purpurea
SapurV1A.2183s0050 2.0kb downstream 2.0kb downstream 3975 true Scaffold2183: 22729-26703 Salix purpurea
SapurV1A.2183s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold2183: 22729-24728 Salix purpurea
SapurV1A.2183s0050 5.0kb upstream 5.0kb upstream 6944 true Scaffold2183: 24729-31672 Salix purpurea
SapurV1A.2183s0050 5.0kb upstream 5.0kb upstream 4969 false Scaffold2183: 26704-31672 Salix purpurea
SapurV1A.2183s0050 5.0kb downstream 5.0kb downstream 6975 true Scaffold2183: 19729-26703 Salix purpurea
SapurV1A.2183s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold2183: 19729-24728 Salix purpurea
SapurV1A.2183s0050 10.0kb upstream 10.0kb upstream 6944 true Scaffold2183: 24729-31672 Salix purpurea
SapurV1A.2183s0050 10.0kb upstream 10.0kb upstream 4969 false Scaffold2183: 26704-31672 Salix purpurea
SapurV1A.2183s0050 10.0kb downstream 10.0kb downstream 11975 true Scaffold2183: 14729-26703 Salix purpurea
SapurV1A.2183s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold2183: 14729-24728 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122390582 5262 Malpighiales View MSA
124251239 5268 Malvidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain