Gene : evm_27.TU.AmTr_v1.0_scaffold00010.255 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  254
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.255 Secondary Identifier:  ? PAC:31572953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.255 0.5kb upstream 0.5kb upstream 16498 true AmTr_v1.0_scaffold00010: 4800311-4816808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 4816309-4816808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 0.5kb downstream 0.5kb downstream 16498 true AmTr_v1.0_scaffold00010: 4799811-4816308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 4799811-4800310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 1.0kb upstream 1.0kb upstream 16998 true AmTr_v1.0_scaffold00010: 4800311-4817308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 4816309-4817308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 1.0kb downstream 1.0kb downstream 16998 true AmTr_v1.0_scaffold00010: 4799311-4816308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 4799311-4800310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 2.0kb upstream 2.0kb upstream 17998 true AmTr_v1.0_scaffold00010: 4800311-4818308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 4816309-4818308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 2.0kb downstream 2.0kb downstream 17998 true AmTr_v1.0_scaffold00010: 4798311-4816308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 4798311-4800310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 5.0kb upstream 5.0kb upstream 20998 true AmTr_v1.0_scaffold00010: 4800311-4821308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 4816309-4821308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 5.0kb downstream 5.0kb downstream 20998 true AmTr_v1.0_scaffold00010: 4795311-4816308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 4795311-4800310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 10.0kb upstream 10.0kb upstream 25998 true AmTr_v1.0_scaffold00010: 4800311-4826308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 4816309-4826308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 10.0kb downstream 10.0kb downstream 25998 true AmTr_v1.0_scaffold00010: 4790311-4816308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.255 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 4790311-4800310 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain