Gene : evm_27.TU.AmTr_v1.0_scaffold00025.401 A. trichopoda v1.0
Defline:  (1 of 1) PTHR30603:SF24 - RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC Genomic Order:  401
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.401 Secondary Identifier:  ? PAC:31566393
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.401 0.5kb upstream 0.5kb upstream 3531 true AmTr_v1.0_scaffold00025: 6135848-6139378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 6135848-6136347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 0.5kb downstream 0.5kb downstream 3531 true AmTr_v1.0_scaffold00025: 6136348-6139878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 6139379-6139878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 1.0kb upstream 1.0kb upstream 4031 true AmTr_v1.0_scaffold00025: 6135348-6139378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 6135348-6136347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 1.0kb downstream 1.0kb downstream 4031 true AmTr_v1.0_scaffold00025: 6136348-6140378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 6139379-6140378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 2.0kb upstream 2.0kb upstream 5031 true AmTr_v1.0_scaffold00025: 6134348-6139378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 6134348-6136347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 2.0kb downstream 2.0kb downstream 5031 true AmTr_v1.0_scaffold00025: 6136348-6141378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 6139379-6141378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 5.0kb upstream 5.0kb upstream 8031 true AmTr_v1.0_scaffold00025: 6131348-6139378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 6131348-6136347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 5.0kb downstream 5.0kb downstream 8031 true AmTr_v1.0_scaffold00025: 6136348-6144378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 6139379-6144378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 10.0kb upstream 10.0kb upstream 13031 true AmTr_v1.0_scaffold00025: 6126348-6139378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 6126348-6136347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 10.0kb downstream 10.0kb downstream 13031 true AmTr_v1.0_scaffold00025: 6136348-6149378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.401 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 6139379-6149378 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048895 5273 Angiosperm View MSA
121311156 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain