Gene : evm_27.TU.AmTr_v1.0_scaffold00025.254 A. trichopoda v1.0
Defline:  (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) Genomic Order:  254
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.254 Secondary Identifier:  ? PAC:31566396
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.254 0.5kb upstream 0.5kb upstream 17632 true AmTr_v1.0_scaffold00025: 3698123-3715754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 3698123-3698622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 0.5kb downstream 0.5kb downstream 17632 true AmTr_v1.0_scaffold00025: 3698623-3716254 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 3715755-3716254 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 1.0kb upstream 1.0kb upstream 18132 true AmTr_v1.0_scaffold00025: 3697623-3715754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 3697623-3698622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 1.0kb downstream 1.0kb downstream 18132 true AmTr_v1.0_scaffold00025: 3698623-3716754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 3715755-3716754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 2.0kb upstream 2.0kb upstream 19132 true AmTr_v1.0_scaffold00025: 3696623-3715754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 3696623-3698622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 2.0kb downstream 2.0kb downstream 19132 true AmTr_v1.0_scaffold00025: 3698623-3717754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 3715755-3717754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 5.0kb upstream 5.0kb upstream 22132 true AmTr_v1.0_scaffold00025: 3693623-3715754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 3693623-3698622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 5.0kb downstream 5.0kb downstream 22132 true AmTr_v1.0_scaffold00025: 3698623-3720754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 3715755-3720754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 10.0kb upstream 10.0kb upstream 27132 true AmTr_v1.0_scaffold00025: 3688623-3715754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 3688623-3698622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 10.0kb downstream 10.0kb downstream 27132 true AmTr_v1.0_scaffold00025: 3698623-3725754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.254 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 3715755-3725754 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043048 5273 Angiosperm View MSA
121343879 5274 Embryophyte View MSA
123425056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain