Gene : evm_27.TU.AmTr_v1.0_scaffold00037.94 A. trichopoda v1.0
Defline:  (1 of 3) PTHR11618//PTHR11618:SF23 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED Genomic Order:  91
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00037.94 Secondary Identifier:  ? PAC:31556218
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00037.94 0.5kb upstream 0.5kb upstream 46398 true AmTr_v1.0_scaffold00037: 3244826-3291223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00037: 3290724-3291223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 0.5kb downstream 0.5kb downstream 46398 true AmTr_v1.0_scaffold00037: 3244326-3290723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00037: 3244326-3244825 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 1.0kb upstream 1.0kb upstream 46898 true AmTr_v1.0_scaffold00037: 3244826-3291723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00037: 3290724-3291723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 1.0kb downstream 1.0kb downstream 46898 true AmTr_v1.0_scaffold00037: 3243826-3290723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00037: 3243826-3244825 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 2.0kb upstream 2.0kb upstream 47898 true AmTr_v1.0_scaffold00037: 3244826-3292723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00037: 3290724-3292723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 2.0kb downstream 2.0kb downstream 47898 true AmTr_v1.0_scaffold00037: 3242826-3290723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00037: 3242826-3244825 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 5.0kb upstream 5.0kb upstream 50898 true AmTr_v1.0_scaffold00037: 3244826-3295723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00037: 3290724-3295723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 5.0kb downstream 5.0kb downstream 50898 true AmTr_v1.0_scaffold00037: 3239826-3290723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00037: 3239826-3244825 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 10.0kb upstream 10.0kb upstream 55898 true AmTr_v1.0_scaffold00037: 3244826-3300723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00037: 3290724-3300723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 10.0kb downstream 10.0kb downstream 55898 true AmTr_v1.0_scaffold00037: 3234826-3290723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.94 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00037: 3234826-3244825 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042980 5273 Angiosperm View MSA
121346449 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain