Gene : evm_27.TU.AmTr_v1.0_scaffold00049.80 A. trichopoda v1.0
Defline:  (1 of 4) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  79
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00049.80 Secondary Identifier:  ? PAC:31574721
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00049.80 0.5kb upstream 0.5kb upstream 6271 true AmTr_v1.0_scaffold00049: 1292778-1299048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00049: 1292778-1293277 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 0.5kb downstream 0.5kb downstream 6271 true AmTr_v1.0_scaffold00049: 1293278-1299548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00049: 1299049-1299548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 1.0kb upstream 1.0kb upstream 6771 true AmTr_v1.0_scaffold00049: 1292278-1299048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00049: 1292278-1293277 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 1.0kb downstream 1.0kb downstream 6771 true AmTr_v1.0_scaffold00049: 1293278-1300048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00049: 1299049-1300048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 2.0kb upstream 2.0kb upstream 7771 true AmTr_v1.0_scaffold00049: 1291278-1299048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00049: 1291278-1293277 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 2.0kb downstream 2.0kb downstream 7771 true AmTr_v1.0_scaffold00049: 1293278-1301048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00049: 1299049-1301048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 5.0kb upstream 5.0kb upstream 10771 true AmTr_v1.0_scaffold00049: 1288278-1299048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00049: 1288278-1293277 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 5.0kb downstream 5.0kb downstream 10771 true AmTr_v1.0_scaffold00049: 1293278-1304048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00049: 1299049-1304048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 10.0kb upstream 10.0kb upstream 15771 true AmTr_v1.0_scaffold00049: 1283278-1299048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00049: 1283278-1293277 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 10.0kb downstream 10.0kb downstream 15771 true AmTr_v1.0_scaffold00049: 1293278-1309048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.80 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00049: 1299049-1309048 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045832 5273 Angiosperm View MSA
121310512 5274 Embryophyte View MSA
123347975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain