Gene : evm_27.TU.AmTr_v1.0_scaffold00086.7 A. trichopoda v1.0
Defline:  (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE Genomic Order:  7
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00086.7 Secondary Identifier:  ? PAC:31571484
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00086.7 0.5kb upstream 0.5kb upstream 13009 true AmTr_v1.0_scaffold00086: 123845-136853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00086: 123845-124344 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 0.5kb downstream 0.5kb downstream 13009 true AmTr_v1.0_scaffold00086: 124345-137353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00086: 136854-137353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 1.0kb upstream 1.0kb upstream 13509 true AmTr_v1.0_scaffold00086: 123345-136853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00086: 123345-124344 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 1.0kb downstream 1.0kb downstream 13509 true AmTr_v1.0_scaffold00086: 124345-137853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00086: 136854-137853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 2.0kb upstream 2.0kb upstream 14509 true AmTr_v1.0_scaffold00086: 122345-136853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00086: 122345-124344 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 2.0kb downstream 2.0kb downstream 14509 true AmTr_v1.0_scaffold00086: 124345-138853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00086: 136854-138853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 5.0kb upstream 5.0kb upstream 17509 true AmTr_v1.0_scaffold00086: 119345-136853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00086: 119345-124344 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 5.0kb downstream 5.0kb downstream 17509 true AmTr_v1.0_scaffold00086: 124345-141853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00086: 136854-141853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 10.0kb upstream 10.0kb upstream 22509 true AmTr_v1.0_scaffold00086: 114345-136853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00086: 114345-124344 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 10.0kb downstream 10.0kb downstream 22509 true AmTr_v1.0_scaffold00086: 124345-146853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.7 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00086: 136854-146853 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042435 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain