Gene : evm_27.TU.AmTr_v1.0_scaffold00099.79 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12217 - LIGATIN Genomic Order:  79
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00099.79 Secondary Identifier:  ? PAC:31570464
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00099.79 0.5kb upstream 0.5kb upstream 15159 true AmTr_v1.0_scaffold00099: 1202227-1217385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00099: 1202227-1202726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 0.5kb downstream 0.5kb downstream 15159 true AmTr_v1.0_scaffold00099: 1202727-1217885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00099: 1217386-1217885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 1.0kb upstream 1.0kb upstream 15659 true AmTr_v1.0_scaffold00099: 1201727-1217385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00099: 1201727-1202726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 1.0kb downstream 1.0kb downstream 15659 true AmTr_v1.0_scaffold00099: 1202727-1218385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00099: 1217386-1218385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 2.0kb upstream 2.0kb upstream 16659 true AmTr_v1.0_scaffold00099: 1200727-1217385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00099: 1200727-1202726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 2.0kb downstream 2.0kb downstream 16659 true AmTr_v1.0_scaffold00099: 1202727-1219385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00099: 1217386-1219385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 5.0kb upstream 5.0kb upstream 19659 true AmTr_v1.0_scaffold00099: 1197727-1217385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00099: 1197727-1202726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 5.0kb downstream 5.0kb downstream 19659 true AmTr_v1.0_scaffold00099: 1202727-1222385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00099: 1217386-1222385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 10.0kb upstream 10.0kb upstream 24659 true AmTr_v1.0_scaffold00099: 1192727-1217385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00099: 1192727-1202726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 10.0kb downstream 10.0kb downstream 24659 true AmTr_v1.0_scaffold00099: 1202727-1227385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.79 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00099: 1217386-1227385 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041515 5273 Angiosperm View MSA
121347053 5274 Embryophyte View MSA
123424674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain