Gene : evm_27.TU.AmTr_v1.0_scaffold04036.1 A. trichopoda v1.0
Defline:  (1 of 2) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold04036.1 Secondary Identifier:  ? PAC:31553805
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold04036.1 0.5kb upstream 0.5kb upstream 755 true AmTr_v1.0_scaffold04036: 1004-1758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold04036: 1004-1503 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 0.5kb downstream 0.5kb downstream 755 true AmTr_v1.0_scaffold04036: 1504-2258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold04036: 1759-2258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 1.0kb upstream 1.0kb upstream 1255 true AmTr_v1.0_scaffold04036: 504-1758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold04036: 504-1503 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 1.0kb downstream 1.0kb downstream 1085 true AmTr_v1.0_scaffold04036: 1504-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 1.0kb downstream 1.0kb downstream 830 false AmTr_v1.0_scaffold04036: 1759-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 2.0kb upstream 2.0kb upstream 1758 true AmTr_v1.0_scaffold04036: 1-1758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 2.0kb upstream 2.0kb upstream 1503 false AmTr_v1.0_scaffold04036: 1-1503 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 2.0kb downstream 2.0kb downstream 1085 true AmTr_v1.0_scaffold04036: 1504-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 2.0kb downstream 2.0kb downstream 830 false AmTr_v1.0_scaffold04036: 1759-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 5.0kb upstream 5.0kb upstream 1758 true AmTr_v1.0_scaffold04036: 1-1758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 5.0kb upstream 5.0kb upstream 1503 false AmTr_v1.0_scaffold04036: 1-1503 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 5.0kb downstream 5.0kb downstream 1085 true AmTr_v1.0_scaffold04036: 1504-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 5.0kb downstream 5.0kb downstream 830 false AmTr_v1.0_scaffold04036: 1759-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 10.0kb upstream 10.0kb upstream 1758 true AmTr_v1.0_scaffold04036: 1-1758 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 10.0kb upstream 10.0kb upstream 1503 false AmTr_v1.0_scaffold04036: 1-1503 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 10.0kb downstream 10.0kb downstream 1085 true AmTr_v1.0_scaffold04036: 1504-2588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold04036.1 10.0kb downstream 10.0kb downstream 830 false AmTr_v1.0_scaffold04036: 1759-2588 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain