Gene : Traes_1AS_0A92A2224 T. aestivum v2.2
Defline:  (1 of 50) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  2
Name:  ? Traes_1AS_0A92A2224 Secondary Identifier:  ? PAC:31763684
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PHOTOALL-PWY Triticum aestivum pathologic  
Taestivum PWY-101 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1AS_0A92A2224 0.5kb upstream 0.5kb upstream 3256 true ta_iwgsc_1as_v1_3302382: 3025-6280 Triticum aestivum
Traes_1AS_0A92A2224 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1as_v1_3302382: 5781-6280 Triticum aestivum
Traes_1AS_0A92A2224 0.5kb downstream 0.5kb downstream 3256 true ta_iwgsc_1as_v1_3302382: 2525-5780 Triticum aestivum
Traes_1AS_0A92A2224 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1as_v1_3302382: 2525-3024 Triticum aestivum
Traes_1AS_0A92A2224 1.0kb upstream 1.0kb upstream 3756 true ta_iwgsc_1as_v1_3302382: 3025-6780 Triticum aestivum
Traes_1AS_0A92A2224 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1as_v1_3302382: 5781-6780 Triticum aestivum
Traes_1AS_0A92A2224 1.0kb downstream 1.0kb downstream 3756 true ta_iwgsc_1as_v1_3302382: 2025-5780 Triticum aestivum
Traes_1AS_0A92A2224 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1as_v1_3302382: 2025-3024 Triticum aestivum
Traes_1AS_0A92A2224 2.0kb upstream 2.0kb upstream 4756 true ta_iwgsc_1as_v1_3302382: 3025-7780 Triticum aestivum
Traes_1AS_0A92A2224 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1as_v1_3302382: 5781-7780 Triticum aestivum
Traes_1AS_0A92A2224 2.0kb downstream 2.0kb downstream 4756 true ta_iwgsc_1as_v1_3302382: 1025-5780 Triticum aestivum
Traes_1AS_0A92A2224 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1as_v1_3302382: 1025-3024 Triticum aestivum
Traes_1AS_0A92A2224 5.0kb upstream 5.0kb upstream 5066 true ta_iwgsc_1as_v1_3302382: 3025-8090 Triticum aestivum
Traes_1AS_0A92A2224 5.0kb upstream 5.0kb upstream 2310 false ta_iwgsc_1as_v1_3302382: 5781-8090 Triticum aestivum
Traes_1AS_0A92A2224 5.0kb downstream 5.0kb downstream 5780 true ta_iwgsc_1as_v1_3302382: 1-5780 Triticum aestivum
Traes_1AS_0A92A2224 5.0kb downstream 5.0kb downstream 3024 false ta_iwgsc_1as_v1_3302382: 1-3024 Triticum aestivum
Traes_1AS_0A92A2224 10.0kb upstream 10.0kb upstream 5066 true ta_iwgsc_1as_v1_3302382: 3025-8090 Triticum aestivum
Traes_1AS_0A92A2224 10.0kb upstream 10.0kb upstream 2310 false ta_iwgsc_1as_v1_3302382: 5781-8090 Triticum aestivum
Traes_1AS_0A92A2224 10.0kb downstream 10.0kb downstream 5780 true ta_iwgsc_1as_v1_3302382: 1-5780 Triticum aestivum
Traes_1AS_0A92A2224 10.0kb downstream 10.0kb downstream 3024 false ta_iwgsc_1as_v1_3302382: 1-3024 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591124 5269 Grass View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain