Gene : Traes_1DS_9572A5433 T. aestivum v2.2
Defline:  (1 of 20) PF01000//PF01193//PF03118 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) // Bacterial RNA polymerase, alpha chain C terminal domain (RNA_pol_A_CTD) Genomic Order:  4
Name:  ? Traes_1DS_9572A5433 Secondary Identifier:  ? PAC:31880376
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1DS_9572A5433 0.5kb upstream 0.5kb upstream 2028 true ta_iwgsc_1ds_v1_1902000: 5638-7665 Triticum aestivum
Traes_1DS_9572A5433 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1ds_v1_1902000: 7166-7665 Triticum aestivum
Traes_1DS_9572A5433 0.5kb downstream 0.5kb downstream 2028 true ta_iwgsc_1ds_v1_1902000: 5138-7165 Triticum aestivum
Traes_1DS_9572A5433 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1ds_v1_1902000: 5138-5637 Triticum aestivum
Traes_1DS_9572A5433 1.0kb upstream 1.0kb upstream 2528 true ta_iwgsc_1ds_v1_1902000: 5638-8165 Triticum aestivum
Traes_1DS_9572A5433 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1ds_v1_1902000: 7166-8165 Triticum aestivum
Traes_1DS_9572A5433 1.0kb downstream 1.0kb downstream 2528 true ta_iwgsc_1ds_v1_1902000: 4638-7165 Triticum aestivum
Traes_1DS_9572A5433 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1ds_v1_1902000: 4638-5637 Triticum aestivum
Traes_1DS_9572A5433 2.0kb upstream 2.0kb upstream 3528 true ta_iwgsc_1ds_v1_1902000: 5638-9165 Triticum aestivum
Traes_1DS_9572A5433 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1ds_v1_1902000: 7166-9165 Triticum aestivum
Traes_1DS_9572A5433 2.0kb downstream 2.0kb downstream 3528 true ta_iwgsc_1ds_v1_1902000: 3638-7165 Triticum aestivum
Traes_1DS_9572A5433 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1ds_v1_1902000: 3638-5637 Triticum aestivum
Traes_1DS_9572A5433 5.0kb upstream 5.0kb upstream 4300 true ta_iwgsc_1ds_v1_1902000: 5638-9937 Triticum aestivum
Traes_1DS_9572A5433 5.0kb upstream 5.0kb upstream 2772 false ta_iwgsc_1ds_v1_1902000: 7166-9937 Triticum aestivum
Traes_1DS_9572A5433 5.0kb downstream 5.0kb downstream 6528 true ta_iwgsc_1ds_v1_1902000: 638-7165 Triticum aestivum
Traes_1DS_9572A5433 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_1ds_v1_1902000: 638-5637 Triticum aestivum
Traes_1DS_9572A5433 10.0kb upstream 10.0kb upstream 4300 true ta_iwgsc_1ds_v1_1902000: 5638-9937 Triticum aestivum
Traes_1DS_9572A5433 10.0kb upstream 10.0kb upstream 2772 false ta_iwgsc_1ds_v1_1902000: 7166-9937 Triticum aestivum
Traes_1DS_9572A5433 10.0kb downstream 10.0kb downstream 7165 true ta_iwgsc_1ds_v1_1902000: 1-7165 Triticum aestivum
Traes_1DS_9572A5433 10.0kb downstream 10.0kb downstream 5637 false ta_iwgsc_1ds_v1_1902000: 1-5637 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029214 5273 Angiosperm View MSA
124586225 5269 Grass View MSA
121350838 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain