Gene : Traes_2AL_2F5D5C19A T. aestivum v2.2
Defline:  (1 of 1) PF02460//PF16414 - Patched family (Patched) // Niemann-Pick C1 N terminus (NPC1_N) Genomic Order:  1
Name:  ? Traes_2AL_2F5D5C19A Secondary Identifier:  ? PAC:31840669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_2AL_2F5D5C19A 0.5kb upstream 0.5kb upstream 19227 true ta_iwgsc_2al_v1_6439106: 10836-30062 Triticum aestivum
Traes_2AL_2F5D5C19A 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_2al_v1_6439106: 10836-11335 Triticum aestivum
Traes_2AL_2F5D5C19A 0.5kb downstream 0.5kb downstream 19227 true ta_iwgsc_2al_v1_6439106: 11336-30562 Triticum aestivum
Traes_2AL_2F5D5C19A 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_2al_v1_6439106: 30063-30562 Triticum aestivum
Traes_2AL_2F5D5C19A 1.0kb upstream 1.0kb upstream 19727 true ta_iwgsc_2al_v1_6439106: 10336-30062 Triticum aestivum
Traes_2AL_2F5D5C19A 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_2al_v1_6439106: 10336-11335 Triticum aestivum
Traes_2AL_2F5D5C19A 1.0kb downstream 1.0kb downstream 19727 true ta_iwgsc_2al_v1_6439106: 11336-31062 Triticum aestivum
Traes_2AL_2F5D5C19A 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_2al_v1_6439106: 30063-31062 Triticum aestivum
Traes_2AL_2F5D5C19A 2.0kb upstream 2.0kb upstream 20727 true ta_iwgsc_2al_v1_6439106: 9336-30062 Triticum aestivum
Traes_2AL_2F5D5C19A 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_2al_v1_6439106: 9336-11335 Triticum aestivum
Traes_2AL_2F5D5C19A 2.0kb downstream 2.0kb downstream 20727 true ta_iwgsc_2al_v1_6439106: 11336-32062 Triticum aestivum
Traes_2AL_2F5D5C19A 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_2al_v1_6439106: 30063-32062 Triticum aestivum
Traes_2AL_2F5D5C19A 5.0kb upstream 5.0kb upstream 23727 true ta_iwgsc_2al_v1_6439106: 6336-30062 Triticum aestivum
Traes_2AL_2F5D5C19A 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_2al_v1_6439106: 6336-11335 Triticum aestivum
Traes_2AL_2F5D5C19A 5.0kb downstream 5.0kb downstream 23727 true ta_iwgsc_2al_v1_6439106: 11336-35062 Triticum aestivum
Traes_2AL_2F5D5C19A 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_2al_v1_6439106: 30063-35062 Triticum aestivum
Traes_2AL_2F5D5C19A 10.0kb upstream 10.0kb upstream 28727 true ta_iwgsc_2al_v1_6439106: 1336-30062 Triticum aestivum
Traes_2AL_2F5D5C19A 10.0kb upstream 10.0kb upstream 10000 false ta_iwgsc_2al_v1_6439106: 1336-11335 Triticum aestivum
Traes_2AL_2F5D5C19A 10.0kb downstream 10.0kb downstream 28727 true ta_iwgsc_2al_v1_6439106: 11336-40062 Triticum aestivum
Traes_2AL_2F5D5C19A 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_2al_v1_6439106: 30063-40062 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577659 5269 Grass View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain