Gene : Traes_3B_1638411DC T. aestivum v2.2
Defline:  (1 of 20) PF01000//PF01193//PF03118 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) // Bacterial RNA polymerase, alpha chain C terminal domain (RNA_pol_A_CTD) Genomic Order:  2
Name:  ? Traes_3B_1638411DC Secondary Identifier:  ? PAC:31908369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3B_1638411DC 0.5kb upstream 0.5kb upstream 2028 true ta_iwgsc_3b_v1_10698611: 1017-3044 Triticum aestivum
Traes_3B_1638411DC 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3b_v1_10698611: 2545-3044 Triticum aestivum
Traes_3B_1638411DC 0.5kb downstream 0.5kb downstream 2028 true ta_iwgsc_3b_v1_10698611: 517-2544 Triticum aestivum
Traes_3B_1638411DC 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3b_v1_10698611: 517-1016 Triticum aestivum
Traes_3B_1638411DC 1.0kb upstream 1.0kb upstream 2528 true ta_iwgsc_3b_v1_10698611: 1017-3544 Triticum aestivum
Traes_3B_1638411DC 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_3b_v1_10698611: 2545-3544 Triticum aestivum
Traes_3B_1638411DC 1.0kb downstream 1.0kb downstream 2528 true ta_iwgsc_3b_v1_10698611: 17-2544 Triticum aestivum
Traes_3B_1638411DC 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3b_v1_10698611: 17-1016 Triticum aestivum
Traes_3B_1638411DC 2.0kb upstream 2.0kb upstream 3528 true ta_iwgsc_3b_v1_10698611: 1017-4544 Triticum aestivum
Traes_3B_1638411DC 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_3b_v1_10698611: 2545-4544 Triticum aestivum
Traes_3B_1638411DC 2.0kb downstream 2.0kb downstream 2544 true ta_iwgsc_3b_v1_10698611: 1-2544 Triticum aestivum
Traes_3B_1638411DC 2.0kb downstream 2.0kb downstream 1016 false ta_iwgsc_3b_v1_10698611: 1-1016 Triticum aestivum
Traes_3B_1638411DC 5.0kb upstream 5.0kb upstream 4296 true ta_iwgsc_3b_v1_10698611: 1017-5312 Triticum aestivum
Traes_3B_1638411DC 5.0kb upstream 5.0kb upstream 2768 false ta_iwgsc_3b_v1_10698611: 2545-5312 Triticum aestivum
Traes_3B_1638411DC 5.0kb downstream 5.0kb downstream 2544 true ta_iwgsc_3b_v1_10698611: 1-2544 Triticum aestivum
Traes_3B_1638411DC 5.0kb downstream 5.0kb downstream 1016 false ta_iwgsc_3b_v1_10698611: 1-1016 Triticum aestivum
Traes_3B_1638411DC 10.0kb upstream 10.0kb upstream 4296 true ta_iwgsc_3b_v1_10698611: 1017-5312 Triticum aestivum
Traes_3B_1638411DC 10.0kb upstream 10.0kb upstream 2768 false ta_iwgsc_3b_v1_10698611: 2545-5312 Triticum aestivum
Traes_3B_1638411DC 10.0kb downstream 10.0kb downstream 2544 true ta_iwgsc_3b_v1_10698611: 1-2544 Triticum aestivum
Traes_3B_1638411DC 10.0kb downstream 10.0kb downstream 1016 false ta_iwgsc_3b_v1_10698611: 1-1016 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029214 5273 Angiosperm View MSA
124586225 5269 Grass View MSA
121350838 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain