Gene : Traes_4DS_8B71AA2E2 T. aestivum v2.2
Defline:  (1 of 4) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Traes_4DS_8B71AA2E2 Secondary Identifier:  ? PAC:32008222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_4DS_8B71AA2E2 0.5kb upstream 0.5kb upstream 5267 true ta_iwgsc_4ds_v1_2289842: 2384-7650 Triticum aestivum
Traes_4DS_8B71AA2E2 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_4ds_v1_2289842: 7151-7650 Triticum aestivum
Traes_4DS_8B71AA2E2 0.5kb downstream 0.5kb downstream 5267 true ta_iwgsc_4ds_v1_2289842: 1884-7150 Triticum aestivum
Traes_4DS_8B71AA2E2 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_4ds_v1_2289842: 1884-2383 Triticum aestivum
Traes_4DS_8B71AA2E2 1.0kb upstream 1.0kb upstream 5735 true ta_iwgsc_4ds_v1_2289842: 2384-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 1.0kb upstream 1.0kb upstream 968 false ta_iwgsc_4ds_v1_2289842: 7151-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 1.0kb downstream 1.0kb downstream 5767 true ta_iwgsc_4ds_v1_2289842: 1384-7150 Triticum aestivum
Traes_4DS_8B71AA2E2 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_4ds_v1_2289842: 1384-2383 Triticum aestivum
Traes_4DS_8B71AA2E2 2.0kb upstream 2.0kb upstream 5735 true ta_iwgsc_4ds_v1_2289842: 2384-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 2.0kb upstream 2.0kb upstream 968 false ta_iwgsc_4ds_v1_2289842: 7151-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 2.0kb downstream 2.0kb downstream 6767 true ta_iwgsc_4ds_v1_2289842: 384-7150 Triticum aestivum
Traes_4DS_8B71AA2E2 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_4ds_v1_2289842: 384-2383 Triticum aestivum
Traes_4DS_8B71AA2E2 5.0kb upstream 5.0kb upstream 5735 true ta_iwgsc_4ds_v1_2289842: 2384-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 5.0kb upstream 5.0kb upstream 968 false ta_iwgsc_4ds_v1_2289842: 7151-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 5.0kb downstream 5.0kb downstream 7150 true ta_iwgsc_4ds_v1_2289842: 1-7150 Triticum aestivum
Traes_4DS_8B71AA2E2 5.0kb downstream 5.0kb downstream 2383 false ta_iwgsc_4ds_v1_2289842: 1-2383 Triticum aestivum
Traes_4DS_8B71AA2E2 10.0kb upstream 10.0kb upstream 5735 true ta_iwgsc_4ds_v1_2289842: 2384-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 10.0kb upstream 10.0kb upstream 968 false ta_iwgsc_4ds_v1_2289842: 7151-8118 Triticum aestivum
Traes_4DS_8B71AA2E2 10.0kb downstream 10.0kb downstream 7150 true ta_iwgsc_4ds_v1_2289842: 1-7150 Triticum aestivum
Traes_4DS_8B71AA2E2 10.0kb downstream 10.0kb downstream 2383 false ta_iwgsc_4ds_v1_2289842: 1-2383 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579844 5269 Grass View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain