Gene : Traes_5BL_1638411DC T. aestivum v2.2
Defline:  (1 of 20) PF01000//PF01193//PF03118 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) // Bacterial RNA polymerase, alpha chain C terminal domain (RNA_pol_A_CTD) Genomic Order:  1
Name:  ? Traes_5BL_1638411DC Secondary Identifier:  ? PAC:31965061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5BL_1638411DC 0.5kb upstream 0.5kb upstream 2028 true ta_iwgsc_5bl_v1_10886771: 382-2409 Triticum aestivum
Traes_5BL_1638411DC 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5bl_v1_10886771: 382-881 Triticum aestivum
Traes_5BL_1638411DC 0.5kb downstream 0.5kb downstream 2028 true ta_iwgsc_5bl_v1_10886771: 882-2909 Triticum aestivum
Traes_5BL_1638411DC 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5bl_v1_10886771: 2410-2909 Triticum aestivum
Traes_5BL_1638411DC 1.0kb upstream 1.0kb upstream 2409 true ta_iwgsc_5bl_v1_10886771: 1-2409 Triticum aestivum
Traes_5BL_1638411DC 1.0kb upstream 1.0kb upstream 881 false ta_iwgsc_5bl_v1_10886771: 1-881 Triticum aestivum
Traes_5BL_1638411DC 1.0kb downstream 1.0kb downstream 2528 true ta_iwgsc_5bl_v1_10886771: 882-3409 Triticum aestivum
Traes_5BL_1638411DC 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5bl_v1_10886771: 2410-3409 Triticum aestivum
Traes_5BL_1638411DC 2.0kb upstream 2.0kb upstream 2409 true ta_iwgsc_5bl_v1_10886771: 1-2409 Triticum aestivum
Traes_5BL_1638411DC 2.0kb upstream 2.0kb upstream 881 false ta_iwgsc_5bl_v1_10886771: 1-881 Triticum aestivum
Traes_5BL_1638411DC 2.0kb downstream 2.0kb downstream 3528 true ta_iwgsc_5bl_v1_10886771: 882-4409 Triticum aestivum
Traes_5BL_1638411DC 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5bl_v1_10886771: 2410-4409 Triticum aestivum
Traes_5BL_1638411DC 5.0kb upstream 5.0kb upstream 2409 true ta_iwgsc_5bl_v1_10886771: 1-2409 Triticum aestivum
Traes_5BL_1638411DC 5.0kb upstream 5.0kb upstream 881 false ta_iwgsc_5bl_v1_10886771: 1-881 Triticum aestivum
Traes_5BL_1638411DC 5.0kb downstream 5.0kb downstream 4393 true ta_iwgsc_5bl_v1_10886771: 882-5274 Triticum aestivum
Traes_5BL_1638411DC 5.0kb downstream 5.0kb downstream 2865 false ta_iwgsc_5bl_v1_10886771: 2410-5274 Triticum aestivum
Traes_5BL_1638411DC 10.0kb upstream 10.0kb upstream 2409 true ta_iwgsc_5bl_v1_10886771: 1-2409 Triticum aestivum
Traes_5BL_1638411DC 10.0kb upstream 10.0kb upstream 881 false ta_iwgsc_5bl_v1_10886771: 1-881 Triticum aestivum
Traes_5BL_1638411DC 10.0kb downstream 10.0kb downstream 4393 true ta_iwgsc_5bl_v1_10886771: 882-5274 Triticum aestivum
Traes_5BL_1638411DC 10.0kb downstream 10.0kb downstream 2865 false ta_iwgsc_5bl_v1_10886771: 2410-5274 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029214 5273 Angiosperm View MSA
124586225 5269 Grass View MSA
121350838 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain