Gene : Traes_6AL_B4EE3CABB T. aestivum v2.2

Defline:  (1 of 22) KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Genomic Order:  1
Name:  ? Traes_6AL_B4EE3CABB Secondary Identifier:  ? PAC:31938919

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6AL_B4EE3CABB 0.5kb upstream 0.5kb upstream 6177 true ta_iwgsc_6al_v1_5822566: 1103-7279 Triticum aestivum
Traes_6AL_B4EE3CABB 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6al_v1_5822566: 1103-1602 Triticum aestivum
Traes_6AL_B4EE3CABB 0.5kb downstream 0.5kb downstream 6177 true ta_iwgsc_6al_v1_5822566: 1603-7779 Triticum aestivum
Traes_6AL_B4EE3CABB 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_6al_v1_5822566: 7280-7779 Triticum aestivum
Traes_6AL_B4EE3CABB 1.0kb upstream 1.0kb upstream 6677 true ta_iwgsc_6al_v1_5822566: 603-7279 Triticum aestivum
Traes_6AL_B4EE3CABB 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6al_v1_5822566: 603-1602 Triticum aestivum
Traes_6AL_B4EE3CABB 1.0kb downstream 1.0kb downstream 6677 true ta_iwgsc_6al_v1_5822566: 1603-8279 Triticum aestivum
Traes_6AL_B4EE3CABB 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_6al_v1_5822566: 7280-8279 Triticum aestivum
Traes_6AL_B4EE3CABB 2.0kb upstream 2.0kb upstream 7279 true ta_iwgsc_6al_v1_5822566: 1-7279 Triticum aestivum
Traes_6AL_B4EE3CABB 2.0kb upstream 2.0kb upstream 1602 false ta_iwgsc_6al_v1_5822566: 1-1602 Triticum aestivum
Traes_6AL_B4EE3CABB 2.0kb downstream 2.0kb downstream 7677 true ta_iwgsc_6al_v1_5822566: 1603-9279 Triticum aestivum
Traes_6AL_B4EE3CABB 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_6al_v1_5822566: 7280-9279 Triticum aestivum
Traes_6AL_B4EE3CABB 5.0kb upstream 5.0kb upstream 7279 true ta_iwgsc_6al_v1_5822566: 1-7279 Triticum aestivum
Traes_6AL_B4EE3CABB 5.0kb upstream 5.0kb upstream 1602 false ta_iwgsc_6al_v1_5822566: 1-1602 Triticum aestivum
Traes_6AL_B4EE3CABB 5.0kb downstream 5.0kb downstream 10677 true ta_iwgsc_6al_v1_5822566: 1603-12279 Triticum aestivum
Traes_6AL_B4EE3CABB 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_6al_v1_5822566: 7280-12279 Triticum aestivum
Traes_6AL_B4EE3CABB 10.0kb upstream 10.0kb upstream 7279 true ta_iwgsc_6al_v1_5822566: 1-7279 Triticum aestivum
Traes_6AL_B4EE3CABB 10.0kb upstream 10.0kb upstream 1602 false ta_iwgsc_6al_v1_5822566: 1-1602 Triticum aestivum
Traes_6AL_B4EE3CABB 10.0kb downstream 10.0kb downstream 15677 true ta_iwgsc_6al_v1_5822566: 1603-17279 Triticum aestivum
Traes_6AL_B4EE3CABB 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_6al_v1_5822566: 7280-17279 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576140 5269 Grass View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain