Gene : orange1.1g039492m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR11439//PTHR11439:SF127 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1
Name:  ? orange1.1g039492m.g Secondary Identifier:  ? PAC:18122196
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039492m.g 0.5kb upstream 0.5kb upstream 1115 true scaffold02419: 12232-13346 Citrus sinensis
orange1.1g039492m.g 0.5kb upstream 0.5kb upstream 500 false scaffold02419: 12232-12731 Citrus sinensis
orange1.1g039492m.g 0.5kb downstream 0.5kb downstream 639 true scaffold02419: 12732-13370 Citrus sinensis
orange1.1g039492m.g 0.5kb downstream 0.5kb downstream 24 false scaffold02419: 13347-13370 Citrus sinensis
orange1.1g039492m.g 1.0kb upstream 1.0kb upstream 1615 true scaffold02419: 11732-13346 Citrus sinensis
orange1.1g039492m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold02419: 11732-12731 Citrus sinensis
orange1.1g039492m.g 1.0kb downstream 1.0kb downstream 639 true scaffold02419: 12732-13370 Citrus sinensis
orange1.1g039492m.g 1.0kb downstream 1.0kb downstream 24 false scaffold02419: 13347-13370 Citrus sinensis
orange1.1g039492m.g 2.0kb upstream 2.0kb upstream 2615 true scaffold02419: 10732-13346 Citrus sinensis
orange1.1g039492m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold02419: 10732-12731 Citrus sinensis
orange1.1g039492m.g 2.0kb downstream 2.0kb downstream 639 true scaffold02419: 12732-13370 Citrus sinensis
orange1.1g039492m.g 2.0kb downstream 2.0kb downstream 24 false scaffold02419: 13347-13370 Citrus sinensis
orange1.1g039492m.g 5.0kb upstream 5.0kb upstream 5615 true scaffold02419: 7732-13346 Citrus sinensis
orange1.1g039492m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold02419: 7732-12731 Citrus sinensis
orange1.1g039492m.g 5.0kb downstream 5.0kb downstream 639 true scaffold02419: 12732-13370 Citrus sinensis
orange1.1g039492m.g 5.0kb downstream 5.0kb downstream 24 false scaffold02419: 13347-13370 Citrus sinensis
orange1.1g039492m.g 10.0kb upstream 10.0kb upstream 10615 true scaffold02419: 2732-13346 Citrus sinensis
orange1.1g039492m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold02419: 2732-12731 Citrus sinensis
orange1.1g039492m.g 10.0kb downstream 10.0kb downstream 639 true scaffold02419: 12732-13370 Citrus sinensis
orange1.1g039492m.g 10.0kb downstream 10.0kb downstream 24 false scaffold02419: 13347-13370 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351377 5266 SBM View MSA
124253923 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain