Gene : orange1.1g000028m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 Genomic Order:  27
Name:  ? orange1.1g000028m.g Secondary Identifier:  ? PAC:18135705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g000028m.g 0.5kb upstream 0.5kb upstream 32320 true scaffold00217: 152584-184903 Citrus sinensis
orange1.1g000028m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00217: 152584-153083 Citrus sinensis
orange1.1g000028m.g 0.5kb downstream 0.5kb downstream 32320 true scaffold00217: 153084-185403 Citrus sinensis
orange1.1g000028m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00217: 184904-185403 Citrus sinensis
orange1.1g000028m.g 1.0kb upstream 1.0kb upstream 32820 true scaffold00217: 152084-184903 Citrus sinensis
orange1.1g000028m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00217: 152084-153083 Citrus sinensis
orange1.1g000028m.g 1.0kb downstream 1.0kb downstream 32820 true scaffold00217: 153084-185903 Citrus sinensis
orange1.1g000028m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00217: 184904-185903 Citrus sinensis
orange1.1g000028m.g 2.0kb upstream 2.0kb upstream 33820 true scaffold00217: 151084-184903 Citrus sinensis
orange1.1g000028m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00217: 151084-153083 Citrus sinensis
orange1.1g000028m.g 2.0kb downstream 2.0kb downstream 33820 true scaffold00217: 153084-186903 Citrus sinensis
orange1.1g000028m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00217: 184904-186903 Citrus sinensis
orange1.1g000028m.g 5.0kb upstream 5.0kb upstream 36820 true scaffold00217: 148084-184903 Citrus sinensis
orange1.1g000028m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00217: 148084-153083 Citrus sinensis
orange1.1g000028m.g 5.0kb downstream 5.0kb downstream 36820 true scaffold00217: 153084-189903 Citrus sinensis
orange1.1g000028m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00217: 184904-189903 Citrus sinensis
orange1.1g000028m.g 10.0kb upstream 10.0kb upstream 41820 true scaffold00217: 143084-184903 Citrus sinensis
orange1.1g000028m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00217: 143084-153083 Citrus sinensis
orange1.1g000028m.g 10.0kb downstream 10.0kb downstream 41820 true scaffold00217: 153084-194903 Citrus sinensis
orange1.1g000028m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00217: 184904-194903 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339674 5266 SBM View MSA
124239824 5268 Malvidae View MSA
124066672 5270 Rosid View MSA
123741349 5271 Pentapetalae View MSA
122793853 5272 Eudicot View MSA
122042276 5273 Angiosperm View MSA
121346115 5274 Embryophyte View MSA
123424266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain