Protein Family : Protein of unknown function (DUF1162) 124066672

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  29

29 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29842.t000001 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED R. communis v0.1 30216   29842: 3177-33392
Cucsa.356480 (1 of 4) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. sativus v1.0 13077   scaffold03577: 1274618-1287694
orange1.1g000028m.g (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. sinensis v1.1 31820   scaffold00217: 153084-184903
AT5G24740 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED A. thaliana TAIR10 19753   Chr5: 8469951-8489703
Thhalv10003500m.g (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 E. salsugineum v1.0 19620   scaffold_6: 3309916-3329535
Ciclev10010886m.g (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. clementina v1.0 20200   scaffold_6: 18624713-18644912
Lus10003835.g (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 L. usitatissimum v1.0 32844   scaffold2124: 48304-81147
Gorai.012G024100 (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 G. raimondii v2.1 41685   Chr12: 2991330-3033014
Thecc1EG001701 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED T. cacao v1.1 44264   scaffold_1: 8818453-8862716
Araha.7188s0004 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 A. halleri v1.1 20007   Scaffold7188: 23060-43066
Cagra.0622s0018 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. grandiflora v1.1 19918   Scaffold622: 82677-102594
Glyma.13G174600 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 G. max Wm82.a2.v1 26000   Chr13: 28884956-28910955
Brara.F02685 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 B. rapa FPsc v1.3 19064   A06: 22208647-22227710
Bostr.5763s0045 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 B. stricta v1.2 20715   Scaffold5763: 556668-577382
Medtr2g007250 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 M. truncatula Mt4.0v1 38419   chr2: 875474-913892
SapurV1A.0478s0160 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED S. purpurea v1.0 18303   Scaffold0478: 154776-173078
Eucgr.K01355 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 E. grandis v2.0 25622   Chr11: 16876699-16902320
Prupe.3G028500 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 P. persica v2.1 29331   Pp03: 2123348-2152678
Manes.09G076300 (1 of 1) PF06650//PF12624//PF16908//PF16910 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) M. esculenta v6.1 37148   Chromosome09: 12056074-12093221
Manes.11G165700 (1 of 1) PF06650//PF12624//PF16908//PF16909//PF16910 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) // Repeating coiled region of VPS13 (VPS13_mid_rpt) M. esculenta v6.1 45417   Chromosome11: 27322069-27367485
AL6G36330 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED A. lyrata v2.1 19940   scaffold_6: 10853583-10873522
Tp57577_TGAC_v2_gene8155 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED T. pratense v2 39964   Tp57577_TGAC_v2_LG2: 21686494-21726457
Phvul.002G328600 (1 of 4) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED P. vulgaris v2.1 24062   Chr02: 49344629-49368690
Potri.001G455600 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED P. trichocarpa v3.1 29956   Chr01: 49018682-49048637
Podel.01G473300 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED P. deltoides WV94 v2.1 17728   Chr01: 51201245-51218972
VIT_215s0024g00240 (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED V. vinifera v2.1 31539   chr15: 314271-345809
Carub.0006s2259 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED C. rubella v1.1 19891   scaffold_6: 8533134-8553024
MD17G1156800 (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED M. domestica v1.1 31277   Chr17: 15074826-15106102
gene05504-v2.0.a2-hybrid (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED F. vesca v2.0.a2 28217   Fvb6: 28201473-28229689

29 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29842.m003504 R. communis v0.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Cucsa.356480.1 C. sativus v1.0 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
AT5G24740.1 A. thaliana TAIR10 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Thhalv10003500m E. salsugineum v1.0 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Lus10003835 L. usitatissimum v1.0 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Gorai.012G024100.1 G. raimondii v2.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Araha.7188s0004.1.p A. halleri v1.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Glyma.13G174600.1.p G. max Wm82.a2.v1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Brara.F02685.1.p B. rapa FPsc v1.3 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Bostr.5763s0045.1.p B. stricta v1.2 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Eucgr.K01355.1.p E. grandis v2.0 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Prupe.3G028500.1.p P. persica v2.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Phvul.002G328600.3.p P. vulgaris v2.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Potri.001G455600.2.p P. trichocarpa v3.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Podel.01G473300.1.p P. deltoides WV94 v2.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
VIT_215s0024g00240.1 V. vinifera v2.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Carub.0006s2259.1.p C. rubella v1.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
orange1.1g000028m C. sinensis v1.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Ciclev10010886m C. clementina v1.0 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Thecc1EG001701t1 T. cacao v1.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Cagra.0622s0018.1.p C. grandiflora v1.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Medtr2g007250.1 M. truncatula Mt4.0v1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
SapurV1A.0478s0160.1.p S. purpurea v1.0 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Manes.11G165700.1.p M. esculenta v6.1 124066672 Protein of unknown function (DUF1162) 2 5270 Rosid
Manes.09G076300.1.p M. esculenta v6.1 124066672 Protein of unknown function (DUF1162) 2 5270 Rosid
AL6G36330.t1 A. lyrata v2.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
Tp57577_TGAC_v2_mRNA8433 T. pratense v2 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
MD17G1156800 M. domestica v1.1 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid
gene05504-v2.0.a2-hybrid.t2 F. vesca v2.0.a2 124066672 Protein of unknown function (DUF1162) 1 5270 Rosid