Gene : Potri.001G455600 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED Genomic Order:  4710
Name:  ? Potri.001G455600 Secondary Identifier:  ? PAC:37275598
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G455600 0.5kb upstream 0.5kb upstream 30456 true Chr01: 49018682-49049137 Populus trichocarpa
Potri.001G455600 0.5kb upstream 0.5kb upstream 500 false Chr01: 49048638-49049137 Populus trichocarpa
Potri.001G455600 0.5kb downstream 0.5kb downstream 30456 true Chr01: 49018182-49048637 Populus trichocarpa
Potri.001G455600 0.5kb downstream 0.5kb downstream 500 false Chr01: 49018182-49018681 Populus trichocarpa
Potri.001G455600 1.0kb upstream 1.0kb upstream 30956 true Chr01: 49018682-49049637 Populus trichocarpa
Potri.001G455600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49048638-49049637 Populus trichocarpa
Potri.001G455600 1.0kb downstream 1.0kb downstream 30956 true Chr01: 49017682-49048637 Populus trichocarpa
Potri.001G455600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49017682-49018681 Populus trichocarpa
Potri.001G455600 2.0kb upstream 2.0kb upstream 31956 true Chr01: 49018682-49050637 Populus trichocarpa
Potri.001G455600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49048638-49050637 Populus trichocarpa
Potri.001G455600 2.0kb downstream 2.0kb downstream 31956 true Chr01: 49016682-49048637 Populus trichocarpa
Potri.001G455600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49016682-49018681 Populus trichocarpa
Potri.001G455600 5.0kb upstream 5.0kb upstream 34956 true Chr01: 49018682-49053637 Populus trichocarpa
Potri.001G455600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49048638-49053637 Populus trichocarpa
Potri.001G455600 5.0kb downstream 5.0kb downstream 34956 true Chr01: 49013682-49048637 Populus trichocarpa
Potri.001G455600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49013682-49018681 Populus trichocarpa
Potri.001G455600 10.0kb upstream 10.0kb upstream 39956 true Chr01: 49018682-49058637 Populus trichocarpa
Potri.001G455600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49048638-49058637 Populus trichocarpa
Potri.001G455600 10.0kb downstream 10.0kb downstream 39956 true Chr01: 49008682-49048637 Populus trichocarpa
Potri.001G455600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49008682-49018681 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451703 5262 Malpighiales View MSA
124239824 5268 Malvidae View MSA
124066672 5270 Rosid View MSA
123741349 5271 Pentapetalae View MSA
122793853 5272 Eudicot View MSA
122042276 5273 Angiosperm View MSA
121346115 5274 Embryophyte View MSA
123424266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain