Protein Family : Protein of unknown function (DUF1162) 123741349

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  39

39 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29842.t000001 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED R. communis v0.1 30216   29842: 3177-33392
Cucsa.356480 (1 of 4) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. sativus v1.0 13077   scaffold03577: 1274618-1287694
orange1.1g000028m.g (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. sinensis v1.1 31820   scaffold00217: 153084-184903
AT5G24740 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED A. thaliana TAIR10 19753   Chr5: 8469951-8489703
Thhalv10003500m.g (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 E. salsugineum v1.0 19620   scaffold_6: 3309916-3329535
Ciclev10010886m.g (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. clementina v1.0 20200   scaffold_6: 18624713-18644912
Lus10003835.g (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 L. usitatissimum v1.0 32844   scaffold2124: 48304-81147
Gorai.012G024100 (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 G. raimondii v2.1 41685   Chr12: 2991330-3033014
Thecc1EG001701 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED T. cacao v1.1 44264   scaffold_1: 8818453-8862716
Migut.L00839 (1 of 1) PF06650//PF16910 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Repeating coiled region of VPS13 (VPS13_mid_rpt) M. guttatus v2.0 9899   scaffold_12: 14631188-14641086
Araha.7188s0004 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 A. halleri v1.1 20007   Scaffold7188: 23060-43066
Cagra.0622s0018 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 C. grandiflora v1.1 19918   Scaffold622: 82677-102594
Glyma.13G174600 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 G. max Wm82.a2.v1 26000   Chr13: 28884956-28910955
Brara.F02685 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 B. rapa FPsc v1.3 19064   A06: 22208647-22227710
Bostr.5763s0045 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 B. stricta v1.2 20715   Scaffold5763: 556668-577382
Medtr2g007250 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 M. truncatula Mt4.0v1 38419   chr2: 875474-913892
SapurV1A.0478s0160 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED S. purpurea v1.0 18303   Scaffold0478: 154776-173078
Eucgr.K01355 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 E. grandis v2.0 25622   Chr11: 16876699-16902320
Prupe.3G028500 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 P. persica v2.1 29331   Pp03: 2123348-2152678
Manes.09G076300 (1 of 1) PF06650//PF12624//PF16908//PF16910 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) M. esculenta v6.1 37148   Chromosome09: 12056074-12093221
Manes.11G165700 (1 of 1) PF06650//PF12624//PF16908//PF16909//PF16910 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) // Repeating coiled region of VPS13 (VPS13_mid_rpt) M. esculenta v6.1 45417   Chromosome11: 27322069-27367485
Kalax.0003s0140 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 K. laxiflora v1.1 49475   scaffold_3: 1296805-1346279
Kaladp0048s0783 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED K. fedtschenkoi v1.1 51439   Scaffold_48: 5850270-5901708
AL6G36330 (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED A. lyrata v2.1 19940   scaffold_6: 10853583-10873522
Tp57577_TGAC_v2_gene8155 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED T. pratense v2 39964   Tp57577_TGAC_v2_LG2: 21686494-21726457
DCAR_018920 (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED D. carota v2.0 46199   DCARv2_Chr5: 34470718-34516916
Solyc11g045160.1 (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED S. lycopersicum ITAG2.4 44827   SL2.50ch11: 31540177-31585003
AUR62026805 (1 of 1) PF00153//PF12624//PF16908//PF16910 - Mitochondrial carrier protein (Mito_carr) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) C. quinoa v1.0 27974   C_Quinoa_Scaffold_2081: 5329554-5357527
AUR62013467 (1 of 1) PF00153//PF06650//PF12624//PF16908//PF16909//PF16910 - Mitochondrial carrier protein (Mito_carr) // SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) // Repeating coiled region of VPS13 (VPS13_mid_rpt) C. quinoa v1.0 42270   C_Quinoa_Scaffold_1611: 3374531-3416800
Phvul.002G328600 (1 of 4) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED P. vulgaris v2.1 24062   Chr02: 49344629-49368690

39 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29842.m003504 R. communis v0.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Cucsa.356480.1 C. sativus v1.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
AT5G24740.1 A. thaliana TAIR10 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Thhalv10003500m E. salsugineum v1.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Lus10003835 L. usitatissimum v1.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Gorai.012G024100.1 G. raimondii v2.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Araha.7188s0004.1.p A. halleri v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Glyma.13G174600.1.p G. max Wm82.a2.v1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Brara.F02685.1.p B. rapa FPsc v1.3 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Bostr.5763s0045.1.p B. stricta v1.2 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Eucgr.K01355.1.p E. grandis v2.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Prupe.3G028500.1.p P. persica v2.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Kalax.0003s0140.1.p K. laxiflora v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Kaladp0048s0783.1.p K. fedtschenkoi v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
DCAR_018920 D. carota v2.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Solyc11g045160.1.1 S. lycopersicum ITAG2.4 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
AUR62013467-RA C. quinoa v1.0 123741349 Protein of unknown function (DUF1162) 2 5271 Pentapetalae
AUR62026805-RA C. quinoa v1.0 123741349 Protein of unknown function (DUF1162) 2 5271 Pentapetalae
Phvul.002G328600.3.p P. vulgaris v2.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Potri.001G455600.2.p P. trichocarpa v3.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Podel.01G473300.1.p P. deltoides WV94 v2.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
VIT_215s0024g00240.1 V. vinifera v2.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Lsat_1_v5_gn_8_5081.1 L. sativa V8 123741349 Protein of unknown function (DUF1162) 2 5271 Pentapetalae
Carub.0006s2259.1.p C. rubella v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
HanXRQChr07g0186761 H. annuus r1.2 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
orange1.1g000028m C. sinensis v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Ciclev10010886m C. clementina v1.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Thecc1EG001701t1 T. cacao v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Migut.L00839.1.p M. guttatus v2.0 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae
Cagra.0622s0018.1.p C. grandiflora v1.1 123741349 Protein of unknown function (DUF1162) 1 5271 Pentapetalae