Gene : Gorai.012G024100 G. raimondii v2.1
Defline:  (1 of 2) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 Genomic Order:  241
Name:  ? Gorai.012G024100 Secondary Identifier:  ? PAC:26827727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G024100 0.5kb upstream 0.5kb upstream 42185 true Chr12: 2990830-3033014 Gossypium raimondii
Gorai.012G024100 0.5kb upstream 0.5kb upstream 500 false Chr12: 2990830-2991329 Gossypium raimondii
Gorai.012G024100 0.5kb downstream 0.5kb downstream 42185 true Chr12: 2991330-3033514 Gossypium raimondii
Gorai.012G024100 0.5kb downstream 0.5kb downstream 500 false Chr12: 3033015-3033514 Gossypium raimondii
Gorai.012G024100 1.0kb upstream 1.0kb upstream 42685 true Chr12: 2990330-3033014 Gossypium raimondii
Gorai.012G024100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2990330-2991329 Gossypium raimondii
Gorai.012G024100 1.0kb downstream 1.0kb downstream 42685 true Chr12: 2991330-3034014 Gossypium raimondii
Gorai.012G024100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3033015-3034014 Gossypium raimondii
Gorai.012G024100 2.0kb upstream 2.0kb upstream 43685 true Chr12: 2989330-3033014 Gossypium raimondii
Gorai.012G024100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2989330-2991329 Gossypium raimondii
Gorai.012G024100 2.0kb downstream 2.0kb downstream 43685 true Chr12: 2991330-3035014 Gossypium raimondii
Gorai.012G024100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3033015-3035014 Gossypium raimondii
Gorai.012G024100 5.0kb upstream 5.0kb upstream 46685 true Chr12: 2986330-3033014 Gossypium raimondii
Gorai.012G024100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2986330-2991329 Gossypium raimondii
Gorai.012G024100 5.0kb downstream 5.0kb downstream 46685 true Chr12: 2991330-3038014 Gossypium raimondii
Gorai.012G024100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3033015-3038014 Gossypium raimondii
Gorai.012G024100 10.0kb upstream 10.0kb upstream 51685 true Chr12: 2981330-3033014 Gossypium raimondii
Gorai.012G024100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2981330-2991329 Gossypium raimondii
Gorai.012G024100 10.0kb downstream 10.0kb downstream 51685 true Chr12: 2991330-3043014 Gossypium raimondii
Gorai.012G024100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3033015-3043014 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827993 5264 Brassicales-Malvales View MSA
124339674 5266 SBM View MSA
124239824 5268 Malvidae View MSA
124066672 5270 Rosid View MSA
123741349 5271 Pentapetalae View MSA
122793853 5272 Eudicot View MSA
122042276 5273 Angiosperm View MSA
121346115 5274 Embryophyte View MSA
123424266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain