Gene : Carub.0006s2259 C. rubella v1.1
Defline:  (1 of 1) PTHR16166//PTHR16166:SF100 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED Genomic Order:  2259
Name:  ? Carub.0006s2259 Secondary Identifier:  ? PAC:39247040
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2259 0.5kb upstream 0.5kb upstream 20391 true scaffold_6: 8533134-8553524 Capsella rubella
Carub.0006s2259 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8553025-8553524 Capsella rubella
Carub.0006s2259 0.5kb downstream 0.5kb downstream 20391 true scaffold_6: 8532634-8553024 Capsella rubella
Carub.0006s2259 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8532634-8533133 Capsella rubella
Carub.0006s2259 1.0kb upstream 1.0kb upstream 20891 true scaffold_6: 8533134-8554024 Capsella rubella
Carub.0006s2259 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8553025-8554024 Capsella rubella
Carub.0006s2259 1.0kb downstream 1.0kb downstream 20891 true scaffold_6: 8532134-8553024 Capsella rubella
Carub.0006s2259 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8532134-8533133 Capsella rubella
Carub.0006s2259 2.0kb upstream 2.0kb upstream 21891 true scaffold_6: 8533134-8555024 Capsella rubella
Carub.0006s2259 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8553025-8555024 Capsella rubella
Carub.0006s2259 2.0kb downstream 2.0kb downstream 21891 true scaffold_6: 8531134-8553024 Capsella rubella
Carub.0006s2259 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8531134-8533133 Capsella rubella
Carub.0006s2259 5.0kb upstream 5.0kb upstream 24891 true scaffold_6: 8533134-8558024 Capsella rubella
Carub.0006s2259 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8553025-8558024 Capsella rubella
Carub.0006s2259 5.0kb downstream 5.0kb downstream 24891 true scaffold_6: 8528134-8553024 Capsella rubella
Carub.0006s2259 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8528134-8533133 Capsella rubella
Carub.0006s2259 10.0kb upstream 10.0kb upstream 29891 true scaffold_6: 8533134-8563024 Capsella rubella
Carub.0006s2259 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8553025-8563024 Capsella rubella
Carub.0006s2259 10.0kb downstream 10.0kb downstream 29891 true scaffold_6: 8523134-8553024 Capsella rubella
Carub.0006s2259 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8523134-8533133 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360513 5261 Brassicaceae View MSA
123827993 5264 Brassicales-Malvales View MSA
124339674 5266 SBM View MSA
124239824 5268 Malvidae View MSA
124066672 5270 Rosid View MSA
123741349 5271 Pentapetalae View MSA
122793853 5272 Eudicot View MSA
122042276 5273 Angiosperm View MSA
121346115 5274 Embryophyte View MSA
123424266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain