Gene : Eucgr.B00599 E. grandis v2.0
Defline:  (1 of 2) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  468
Name:  ? Eucgr.B00599 Secondary Identifier:  ? PAC:32060558
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00599 0.5kb upstream 0.5kb upstream 4707 true Chr02: 6084361-6089067 Eucalyptus grandis
Eucgr.B00599 0.5kb upstream 0.5kb upstream 500 false Chr02: 6084361-6084860 Eucalyptus grandis
Eucgr.B00599 0.5kb downstream 0.5kb downstream 4707 true Chr02: 6084861-6089567 Eucalyptus grandis
Eucgr.B00599 0.5kb downstream 0.5kb downstream 500 false Chr02: 6089068-6089567 Eucalyptus grandis
Eucgr.B00599 1.0kb upstream 1.0kb upstream 5207 true Chr02: 6083861-6089067 Eucalyptus grandis
Eucgr.B00599 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6083861-6084860 Eucalyptus grandis
Eucgr.B00599 1.0kb downstream 1.0kb downstream 5207 true Chr02: 6084861-6090067 Eucalyptus grandis
Eucgr.B00599 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6089068-6090067 Eucalyptus grandis
Eucgr.B00599 2.0kb upstream 2.0kb upstream 6207 true Chr02: 6082861-6089067 Eucalyptus grandis
Eucgr.B00599 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6082861-6084860 Eucalyptus grandis
Eucgr.B00599 2.0kb downstream 2.0kb downstream 6207 true Chr02: 6084861-6091067 Eucalyptus grandis
Eucgr.B00599 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6089068-6091067 Eucalyptus grandis
Eucgr.B00599 5.0kb upstream 5.0kb upstream 9207 true Chr02: 6079861-6089067 Eucalyptus grandis
Eucgr.B00599 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6079861-6084860 Eucalyptus grandis
Eucgr.B00599 5.0kb downstream 5.0kb downstream 9207 true Chr02: 6084861-6094067 Eucalyptus grandis
Eucgr.B00599 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6089068-6094067 Eucalyptus grandis
Eucgr.B00599 10.0kb upstream 10.0kb upstream 14207 true Chr02: 6074861-6089067 Eucalyptus grandis
Eucgr.B00599 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6074861-6084860 Eucalyptus grandis
Eucgr.B00599 10.0kb downstream 10.0kb downstream 14207 true Chr02: 6084861-6099067 Eucalyptus grandis
Eucgr.B00599 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6089068-6099067 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062853 5270 Rosid View MSA
123746510 5271 Pentapetalae View MSA
122790836 5272 Eudicot View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.01767 0.0 24.8662   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.38251 0.0 13.3671    
cufflinks 0.400026 0.0 1.558 Low  
cufflinks 2.41739 0.0 6.78502    
cufflinks 0.287645 0.0 2.60176 Low Low

0 Strain