Gene : Eucgr.B01502 E. grandis v2.0
Defline:  (1 of 1) PTHR12834 - SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN Genomic Order:  1159
Name:  ? Eucgr.B01502 Secondary Identifier:  ? PAC:32061323
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01502 0.5kb upstream 0.5kb upstream 5911 true Chr02: 24116262-24122172 Eucalyptus grandis
Eucgr.B01502 0.5kb upstream 0.5kb upstream 500 false Chr02: 24121673-24122172 Eucalyptus grandis
Eucgr.B01502 0.5kb downstream 0.5kb downstream 5911 true Chr02: 24115762-24121672 Eucalyptus grandis
Eucgr.B01502 0.5kb downstream 0.5kb downstream 500 false Chr02: 24115762-24116261 Eucalyptus grandis
Eucgr.B01502 1.0kb upstream 1.0kb upstream 6411 true Chr02: 24116262-24122672 Eucalyptus grandis
Eucgr.B01502 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24121673-24122672 Eucalyptus grandis
Eucgr.B01502 1.0kb downstream 1.0kb downstream 6411 true Chr02: 24115262-24121672 Eucalyptus grandis
Eucgr.B01502 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24115262-24116261 Eucalyptus grandis
Eucgr.B01502 2.0kb upstream 2.0kb upstream 7411 true Chr02: 24116262-24123672 Eucalyptus grandis
Eucgr.B01502 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24121673-24123672 Eucalyptus grandis
Eucgr.B01502 2.0kb downstream 2.0kb downstream 7411 true Chr02: 24114262-24121672 Eucalyptus grandis
Eucgr.B01502 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24114262-24116261 Eucalyptus grandis
Eucgr.B01502 5.0kb upstream 5.0kb upstream 10411 true Chr02: 24116262-24126672 Eucalyptus grandis
Eucgr.B01502 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24121673-24126672 Eucalyptus grandis
Eucgr.B01502 5.0kb downstream 5.0kb downstream 10411 true Chr02: 24111262-24121672 Eucalyptus grandis
Eucgr.B01502 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24111262-24116261 Eucalyptus grandis
Eucgr.B01502 10.0kb upstream 10.0kb upstream 15411 true Chr02: 24116262-24131672 Eucalyptus grandis
Eucgr.B01502 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24121673-24131672 Eucalyptus grandis
Eucgr.B01502 10.0kb downstream 10.0kb downstream 15411 true Chr02: 24106262-24121672 Eucalyptus grandis
Eucgr.B01502 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24106262-24116261 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061041 5270 Rosid View MSA
123743448 5271 Pentapetalae View MSA
122791780 5272 Eudicot View MSA
122044032 5273 Angiosperm View MSA
121347792 5274 Embryophyte View MSA
123425119 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9097 0.0 26.2456   Low
cufflinks 30.0545 0.0 67.2347    
cufflinks 13.1409 0.0 31.0772   Low
cufflinks 31.8045 0.0 70.9395    
cufflinks 29.964 0.0 67.0438    
cufflinks 21.1613 0.0 48.1483    

0 Strain