Gene : Eucgr.C01848 E. grandis v2.0
Defline:  (1 of 6) PTHR13793//PTHR13793:SF94 - PHD FINGER PROTEINS Genomic Order:  1572
Name:  ? Eucgr.C01848 Secondary Identifier:  ? PAC:32040068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01848 0.5kb upstream 0.5kb upstream 4122 true Chr03: 35862565-35866686 Eucalyptus grandis
Eucgr.C01848 0.5kb upstream 0.5kb upstream 500 false Chr03: 35866187-35866686 Eucalyptus grandis
Eucgr.C01848 0.5kb downstream 0.5kb downstream 4122 true Chr03: 35862065-35866186 Eucalyptus grandis
Eucgr.C01848 0.5kb downstream 0.5kb downstream 500 false Chr03: 35862065-35862564 Eucalyptus grandis
Eucgr.C01848 1.0kb upstream 1.0kb upstream 4622 true Chr03: 35862565-35867186 Eucalyptus grandis
Eucgr.C01848 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35866187-35867186 Eucalyptus grandis
Eucgr.C01848 1.0kb downstream 1.0kb downstream 4622 true Chr03: 35861565-35866186 Eucalyptus grandis
Eucgr.C01848 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35861565-35862564 Eucalyptus grandis
Eucgr.C01848 2.0kb upstream 2.0kb upstream 5622 true Chr03: 35862565-35868186 Eucalyptus grandis
Eucgr.C01848 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35866187-35868186 Eucalyptus grandis
Eucgr.C01848 2.0kb downstream 2.0kb downstream 5622 true Chr03: 35860565-35866186 Eucalyptus grandis
Eucgr.C01848 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35860565-35862564 Eucalyptus grandis
Eucgr.C01848 5.0kb upstream 5.0kb upstream 8622 true Chr03: 35862565-35871186 Eucalyptus grandis
Eucgr.C01848 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35866187-35871186 Eucalyptus grandis
Eucgr.C01848 5.0kb downstream 5.0kb downstream 8622 true Chr03: 35857565-35866186 Eucalyptus grandis
Eucgr.C01848 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35857565-35862564 Eucalyptus grandis
Eucgr.C01848 10.0kb upstream 10.0kb upstream 13622 true Chr03: 35862565-35876186 Eucalyptus grandis
Eucgr.C01848 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35866187-35876186 Eucalyptus grandis
Eucgr.C01848 10.0kb downstream 10.0kb downstream 13622 true Chr03: 35852565-35866186 Eucalyptus grandis
Eucgr.C01848 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35852565-35862564 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067852 5270 Rosid View MSA
123743276 5271 Pentapetalae View MSA
122787716 5272 Eudicot View MSA
122044073 5273 Angiosperm View MSA
121310234 5274 Embryophyte View MSA
123347780 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156746 0.0 0.532025 Low  
cufflinks 0.0339048 0.0 0.155638 Low Low
cufflinks 0.172653 0.0 0.574762 Low  
cufflinks 0.130177 0.0 0.447074 Low  
cufflinks 0.123507 0.0 0.429325 Low  
cufflinks 0.075092 0.0 0.283453 Low  

0 Strain