Gene : Eucgr.C01562 E. grandis v2.0
Defline:  (1 of 6) PTHR13793//PTHR13793:SF94 - PHD FINGER PROTEINS Genomic Order:  1274
Name:  ? Eucgr.C01562 Secondary Identifier:  ? PAC:32038541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01562 0.5kb upstream 0.5kb upstream 3270 true Chr03: 26689209-26692478 Eucalyptus grandis
Eucgr.C01562 0.5kb upstream 0.5kb upstream 500 false Chr03: 26691979-26692478 Eucalyptus grandis
Eucgr.C01562 0.5kb downstream 0.5kb downstream 3270 true Chr03: 26688709-26691978 Eucalyptus grandis
Eucgr.C01562 0.5kb downstream 0.5kb downstream 500 false Chr03: 26688709-26689208 Eucalyptus grandis
Eucgr.C01562 1.0kb upstream 1.0kb upstream 3770 true Chr03: 26689209-26692978 Eucalyptus grandis
Eucgr.C01562 1.0kb upstream 1.0kb upstream 1000 false Chr03: 26691979-26692978 Eucalyptus grandis
Eucgr.C01562 1.0kb downstream 1.0kb downstream 3770 true Chr03: 26688209-26691978 Eucalyptus grandis
Eucgr.C01562 1.0kb downstream 1.0kb downstream 1000 false Chr03: 26688209-26689208 Eucalyptus grandis
Eucgr.C01562 2.0kb upstream 2.0kb upstream 4770 true Chr03: 26689209-26693978 Eucalyptus grandis
Eucgr.C01562 2.0kb upstream 2.0kb upstream 2000 false Chr03: 26691979-26693978 Eucalyptus grandis
Eucgr.C01562 2.0kb downstream 2.0kb downstream 4770 true Chr03: 26687209-26691978 Eucalyptus grandis
Eucgr.C01562 2.0kb downstream 2.0kb downstream 2000 false Chr03: 26687209-26689208 Eucalyptus grandis
Eucgr.C01562 5.0kb upstream 5.0kb upstream 7770 true Chr03: 26689209-26696978 Eucalyptus grandis
Eucgr.C01562 5.0kb upstream 5.0kb upstream 5000 false Chr03: 26691979-26696978 Eucalyptus grandis
Eucgr.C01562 5.0kb downstream 5.0kb downstream 7770 true Chr03: 26684209-26691978 Eucalyptus grandis
Eucgr.C01562 5.0kb downstream 5.0kb downstream 5000 false Chr03: 26684209-26689208 Eucalyptus grandis
Eucgr.C01562 10.0kb upstream 10.0kb upstream 12770 true Chr03: 26689209-26701978 Eucalyptus grandis
Eucgr.C01562 10.0kb upstream 10.0kb upstream 10000 false Chr03: 26691979-26701978 Eucalyptus grandis
Eucgr.C01562 10.0kb downstream 10.0kb downstream 12770 true Chr03: 26679209-26691978 Eucalyptus grandis
Eucgr.C01562 10.0kb downstream 10.0kb downstream 10000 false Chr03: 26679209-26689208 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067852 5270 Rosid View MSA
123743276 5271 Pentapetalae View MSA
122787716 5272 Eudicot View MSA
122044073 5273 Angiosperm View MSA
121310234 5274 Embryophyte View MSA
123347780 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.69412 0.0 4.49517    
cufflinks 0.946478 0.0 2.64569   Low
cufflinks 2.49724 0.0 6.35024    
cufflinks 2.21148 0.0 5.66852    
cufflinks 4.54565 0.0 10.8817   High
cufflinks 1.94449 0.0 5.11634    

0 Strain