Gene : Eucgr.F02888 E. grandis v2.0
Defline:  (1 of 1) PTHR22849:SF43 - U-BOX DOMAIN-CONTAINING PROTEIN 54-RELATED Genomic Order:  2547
Name:  ? Eucgr.F02888 Secondary Identifier:  ? PAC:32052662
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02888 0.5kb upstream 0.5kb upstream 2075 true Chr06: 41073825-41075899 Eucalyptus grandis
Eucgr.F02888 0.5kb upstream 0.5kb upstream 500 false Chr06: 41075400-41075899 Eucalyptus grandis
Eucgr.F02888 0.5kb downstream 0.5kb downstream 2075 true Chr06: 41073325-41075399 Eucalyptus grandis
Eucgr.F02888 0.5kb downstream 0.5kb downstream 500 false Chr06: 41073325-41073824 Eucalyptus grandis
Eucgr.F02888 1.0kb upstream 1.0kb upstream 2575 true Chr06: 41073825-41076399 Eucalyptus grandis
Eucgr.F02888 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41075400-41076399 Eucalyptus grandis
Eucgr.F02888 1.0kb downstream 1.0kb downstream 2575 true Chr06: 41072825-41075399 Eucalyptus grandis
Eucgr.F02888 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41072825-41073824 Eucalyptus grandis
Eucgr.F02888 2.0kb upstream 2.0kb upstream 3575 true Chr06: 41073825-41077399 Eucalyptus grandis
Eucgr.F02888 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41075400-41077399 Eucalyptus grandis
Eucgr.F02888 2.0kb downstream 2.0kb downstream 3575 true Chr06: 41071825-41075399 Eucalyptus grandis
Eucgr.F02888 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41071825-41073824 Eucalyptus grandis
Eucgr.F02888 5.0kb upstream 5.0kb upstream 6575 true Chr06: 41073825-41080399 Eucalyptus grandis
Eucgr.F02888 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41075400-41080399 Eucalyptus grandis
Eucgr.F02888 5.0kb downstream 5.0kb downstream 6575 true Chr06: 41068825-41075399 Eucalyptus grandis
Eucgr.F02888 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41068825-41073824 Eucalyptus grandis
Eucgr.F02888 10.0kb upstream 10.0kb upstream 11575 true Chr06: 41073825-41085399 Eucalyptus grandis
Eucgr.F02888 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41075400-41085399 Eucalyptus grandis
Eucgr.F02888 10.0kb downstream 10.0kb downstream 11575 true Chr06: 41063825-41075399 Eucalyptus grandis
Eucgr.F02888 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41063825-41073824 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3544 0.0 56.2584    
cufflinks 121.794 0.0 280.921 High  
cufflinks 71.6256 0.0 160.365 High  
cufflinks 63.2766 0.0 140.954 High  
cufflinks 172.447 0.0 409.865 High  
cufflinks 4.70119 0.0 11.6843   Low

0 Strain