Gene : Eucgr.F03200 E. grandis v2.0
Defline:  (1 of 3) PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Genomic Order:  2845
Name:  ? Eucgr.F03200 Secondary Identifier:  ? PAC:32053565
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03200 0.5kb upstream 0.5kb upstream 7009 true Chr06: 43817376-43824384 Eucalyptus grandis
Eucgr.F03200 0.5kb upstream 0.5kb upstream 500 false Chr06: 43817376-43817875 Eucalyptus grandis
Eucgr.F03200 0.5kb downstream 0.5kb downstream 7009 true Chr06: 43817876-43824884 Eucalyptus grandis
Eucgr.F03200 0.5kb downstream 0.5kb downstream 500 false Chr06: 43824385-43824884 Eucalyptus grandis
Eucgr.F03200 1.0kb upstream 1.0kb upstream 7509 true Chr06: 43816876-43824384 Eucalyptus grandis
Eucgr.F03200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43816876-43817875 Eucalyptus grandis
Eucgr.F03200 1.0kb downstream 1.0kb downstream 7509 true Chr06: 43817876-43825384 Eucalyptus grandis
Eucgr.F03200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43824385-43825384 Eucalyptus grandis
Eucgr.F03200 2.0kb upstream 2.0kb upstream 8509 true Chr06: 43815876-43824384 Eucalyptus grandis
Eucgr.F03200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43815876-43817875 Eucalyptus grandis
Eucgr.F03200 2.0kb downstream 2.0kb downstream 8509 true Chr06: 43817876-43826384 Eucalyptus grandis
Eucgr.F03200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43824385-43826384 Eucalyptus grandis
Eucgr.F03200 5.0kb upstream 5.0kb upstream 11509 true Chr06: 43812876-43824384 Eucalyptus grandis
Eucgr.F03200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43812876-43817875 Eucalyptus grandis
Eucgr.F03200 5.0kb downstream 5.0kb downstream 11509 true Chr06: 43817876-43829384 Eucalyptus grandis
Eucgr.F03200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43824385-43829384 Eucalyptus grandis
Eucgr.F03200 10.0kb upstream 10.0kb upstream 16509 true Chr06: 43807876-43824384 Eucalyptus grandis
Eucgr.F03200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43807876-43817875 Eucalyptus grandis
Eucgr.F03200 10.0kb downstream 10.0kb downstream 16509 true Chr06: 43817876-43834384 Eucalyptus grandis
Eucgr.F03200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43824385-43834384 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.22135 0.0 21.0833    
cufflinks 8.67197 0.0 19.9655    
cufflinks 13.2208 0.0 29.5501   High
cufflinks 8.42101 0.0 19.3785    
cufflinks 9.26379 0.0 21.1062    
cufflinks 9.98515 0.0 22.8805    

0 Strain