Gene : Eucgr.I02304 E. grandis v2.0
Defline:  (1 of 2) PTHR19376:SF37 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 Genomic Order:  1938
Name:  ? Eucgr.I02304 Secondary Identifier:  ? PAC:32064963
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02304 0.5kb upstream 0.5kb upstream 9482 true Chr09: 33395585-33405066 Eucalyptus grandis
Eucgr.I02304 0.5kb upstream 0.5kb upstream 500 false Chr09: 33404567-33405066 Eucalyptus grandis
Eucgr.I02304 0.5kb downstream 0.5kb downstream 9482 true Chr09: 33395085-33404566 Eucalyptus grandis
Eucgr.I02304 0.5kb downstream 0.5kb downstream 500 false Chr09: 33395085-33395584 Eucalyptus grandis
Eucgr.I02304 1.0kb upstream 1.0kb upstream 9982 true Chr09: 33395585-33405566 Eucalyptus grandis
Eucgr.I02304 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33404567-33405566 Eucalyptus grandis
Eucgr.I02304 1.0kb downstream 1.0kb downstream 9982 true Chr09: 33394585-33404566 Eucalyptus grandis
Eucgr.I02304 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33394585-33395584 Eucalyptus grandis
Eucgr.I02304 2.0kb upstream 2.0kb upstream 10982 true Chr09: 33395585-33406566 Eucalyptus grandis
Eucgr.I02304 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33404567-33406566 Eucalyptus grandis
Eucgr.I02304 2.0kb downstream 2.0kb downstream 10982 true Chr09: 33393585-33404566 Eucalyptus grandis
Eucgr.I02304 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33393585-33395584 Eucalyptus grandis
Eucgr.I02304 5.0kb upstream 5.0kb upstream 13982 true Chr09: 33395585-33409566 Eucalyptus grandis
Eucgr.I02304 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33404567-33409566 Eucalyptus grandis
Eucgr.I02304 5.0kb downstream 5.0kb downstream 13982 true Chr09: 33390585-33404566 Eucalyptus grandis
Eucgr.I02304 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33390585-33395584 Eucalyptus grandis
Eucgr.I02304 10.0kb upstream 10.0kb upstream 18982 true Chr09: 33395585-33414566 Eucalyptus grandis
Eucgr.I02304 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33404567-33414566 Eucalyptus grandis
Eucgr.I02304 10.0kb downstream 10.0kb downstream 18982 true Chr09: 33385585-33404566 Eucalyptus grandis
Eucgr.I02304 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33385585-33395584 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041040 5273 Angiosperm View MSA
124064405 5270 Rosid View MSA
123740882 5271 Pentapetalae View MSA
122790504 5272 Eudicot View MSA
121343935 5274 Embryophyte View MSA
123424077 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5338 0.0 34.8586    
cufflinks 11.1152 0.0 24.7056    
cufflinks 16.8341 0.0 37.9873    
cufflinks 8.29456 0.0 18.3532   Low
cufflinks 7.99871 0.0 17.6913   Low
cufflinks 19.625 0.0 44.4877   High

0 Strain