Gene : Eucgr.J02246 E. grandis v2.0
Defline:  (1 of 2) PTHR24012:SF426 - RNA-BINDING PROTEIN-RELATED Genomic Order:  1904
Name:  ? Eucgr.J02246 Secondary Identifier:  ? PAC:32033165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02246 0.5kb upstream 0.5kb upstream 3693 true Chr10: 27575000-27578692 Eucalyptus grandis
Eucgr.J02246 0.5kb upstream 0.5kb upstream 500 false Chr10: 27575000-27575499 Eucalyptus grandis
Eucgr.J02246 0.5kb downstream 0.5kb downstream 3693 true Chr10: 27575500-27579192 Eucalyptus grandis
Eucgr.J02246 0.5kb downstream 0.5kb downstream 500 false Chr10: 27578693-27579192 Eucalyptus grandis
Eucgr.J02246 1.0kb upstream 1.0kb upstream 4193 true Chr10: 27574500-27578692 Eucalyptus grandis
Eucgr.J02246 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27574500-27575499 Eucalyptus grandis
Eucgr.J02246 1.0kb downstream 1.0kb downstream 4193 true Chr10: 27575500-27579692 Eucalyptus grandis
Eucgr.J02246 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27578693-27579692 Eucalyptus grandis
Eucgr.J02246 2.0kb upstream 2.0kb upstream 5193 true Chr10: 27573500-27578692 Eucalyptus grandis
Eucgr.J02246 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27573500-27575499 Eucalyptus grandis
Eucgr.J02246 2.0kb downstream 2.0kb downstream 5193 true Chr10: 27575500-27580692 Eucalyptus grandis
Eucgr.J02246 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27578693-27580692 Eucalyptus grandis
Eucgr.J02246 5.0kb upstream 5.0kb upstream 8193 true Chr10: 27570500-27578692 Eucalyptus grandis
Eucgr.J02246 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27570500-27575499 Eucalyptus grandis
Eucgr.J02246 5.0kb downstream 5.0kb downstream 8193 true Chr10: 27575500-27583692 Eucalyptus grandis
Eucgr.J02246 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27578693-27583692 Eucalyptus grandis
Eucgr.J02246 10.0kb upstream 10.0kb upstream 13193 true Chr10: 27565500-27578692 Eucalyptus grandis
Eucgr.J02246 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27565500-27575499 Eucalyptus grandis
Eucgr.J02246 10.0kb downstream 10.0kb downstream 13193 true Chr10: 27575500-27588692 Eucalyptus grandis
Eucgr.J02246 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27578693-27588692 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068966 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.6122 0.0 104.034 High High
cufflinks 23.4183 0.0 51.8085   Low
cufflinks 36.4795 0.0 80.9354 High  
cufflinks 25.1974 0.0 55.7226   Low
cufflinks 36.2202 0.0 80.3189    
cufflinks 43.7326 0.0 97.4765 High  

0 Strain