Gene : Eucgr.J02099 E. grandis v2.0
Defline:  (1 of 1) PTHR31057:SF0 - E3 UFM1-PROTEIN LIGASE 1 Genomic Order:  1774
Name:  ? Eucgr.J02099 Secondary Identifier:  ? PAC:32035330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02099 0.5kb upstream 0.5kb upstream 10550 true Chr10: 26160155-26170704 Eucalyptus grandis
Eucgr.J02099 0.5kb upstream 0.5kb upstream 500 false Chr10: 26160155-26160654 Eucalyptus grandis
Eucgr.J02099 0.5kb downstream 0.5kb downstream 10550 true Chr10: 26160655-26171204 Eucalyptus grandis
Eucgr.J02099 0.5kb downstream 0.5kb downstream 500 false Chr10: 26170705-26171204 Eucalyptus grandis
Eucgr.J02099 1.0kb upstream 1.0kb upstream 11050 true Chr10: 26159655-26170704 Eucalyptus grandis
Eucgr.J02099 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26159655-26160654 Eucalyptus grandis
Eucgr.J02099 1.0kb downstream 1.0kb downstream 11050 true Chr10: 26160655-26171704 Eucalyptus grandis
Eucgr.J02099 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26170705-26171704 Eucalyptus grandis
Eucgr.J02099 2.0kb upstream 2.0kb upstream 12050 true Chr10: 26158655-26170704 Eucalyptus grandis
Eucgr.J02099 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26158655-26160654 Eucalyptus grandis
Eucgr.J02099 2.0kb downstream 2.0kb downstream 12050 true Chr10: 26160655-26172704 Eucalyptus grandis
Eucgr.J02099 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26170705-26172704 Eucalyptus grandis
Eucgr.J02099 5.0kb upstream 5.0kb upstream 15050 true Chr10: 26155655-26170704 Eucalyptus grandis
Eucgr.J02099 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26155655-26160654 Eucalyptus grandis
Eucgr.J02099 5.0kb downstream 5.0kb downstream 15050 true Chr10: 26160655-26175704 Eucalyptus grandis
Eucgr.J02099 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26170705-26175704 Eucalyptus grandis
Eucgr.J02099 10.0kb upstream 10.0kb upstream 20050 true Chr10: 26150655-26170704 Eucalyptus grandis
Eucgr.J02099 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26150655-26160654 Eucalyptus grandis
Eucgr.J02099 10.0kb downstream 10.0kb downstream 20050 true Chr10: 26160655-26180704 Eucalyptus grandis
Eucgr.J02099 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26170705-26180704 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026361 5273 Angiosperm View MSA
124064976 5270 Rosid View MSA
123747410 5271 Pentapetalae View MSA
122787420 5272 Eudicot View MSA
121346113 5274 Embryophyte View MSA
123424330 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5159 0.0 26.3962    
cufflinks 10.734 0.0 26.7399    
cufflinks 10.7108 0.0 29.5886    
cufflinks 20.9613 0.0 53.0638   High
cufflinks 14.0493 0.0 37.2807    
cufflinks 16.8966 0.0 42.3422    

0 Strain