Gene : Eucgr.J02065 E. grandis v2.0
Defline:  (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1742
Name:  ? Eucgr.J02065 Secondary Identifier:  ? PAC:32033206
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02065 0.5kb upstream 0.5kb upstream 3219 true Chr10: 25854612-25857830 Eucalyptus grandis
Eucgr.J02065 0.5kb upstream 0.5kb upstream 500 false Chr10: 25854612-25855111 Eucalyptus grandis
Eucgr.J02065 0.5kb downstream 0.5kb downstream 3219 true Chr10: 25855112-25858330 Eucalyptus grandis
Eucgr.J02065 0.5kb downstream 0.5kb downstream 500 false Chr10: 25857831-25858330 Eucalyptus grandis
Eucgr.J02065 1.0kb upstream 1.0kb upstream 3719 true Chr10: 25854112-25857830 Eucalyptus grandis
Eucgr.J02065 1.0kb upstream 1.0kb upstream 1000 false Chr10: 25854112-25855111 Eucalyptus grandis
Eucgr.J02065 1.0kb downstream 1.0kb downstream 3719 true Chr10: 25855112-25858830 Eucalyptus grandis
Eucgr.J02065 1.0kb downstream 1.0kb downstream 1000 false Chr10: 25857831-25858830 Eucalyptus grandis
Eucgr.J02065 2.0kb upstream 2.0kb upstream 4719 true Chr10: 25853112-25857830 Eucalyptus grandis
Eucgr.J02065 2.0kb upstream 2.0kb upstream 2000 false Chr10: 25853112-25855111 Eucalyptus grandis
Eucgr.J02065 2.0kb downstream 2.0kb downstream 4719 true Chr10: 25855112-25859830 Eucalyptus grandis
Eucgr.J02065 2.0kb downstream 2.0kb downstream 2000 false Chr10: 25857831-25859830 Eucalyptus grandis
Eucgr.J02065 5.0kb upstream 5.0kb upstream 7719 true Chr10: 25850112-25857830 Eucalyptus grandis
Eucgr.J02065 5.0kb upstream 5.0kb upstream 5000 false Chr10: 25850112-25855111 Eucalyptus grandis
Eucgr.J02065 5.0kb downstream 5.0kb downstream 7719 true Chr10: 25855112-25862830 Eucalyptus grandis
Eucgr.J02065 5.0kb downstream 5.0kb downstream 5000 false Chr10: 25857831-25862830 Eucalyptus grandis
Eucgr.J02065 10.0kb upstream 10.0kb upstream 12719 true Chr10: 25845112-25857830 Eucalyptus grandis
Eucgr.J02065 10.0kb upstream 10.0kb upstream 10000 false Chr10: 25845112-25855111 Eucalyptus grandis
Eucgr.J02065 10.0kb downstream 10.0kb downstream 12719 true Chr10: 25855112-25867830 Eucalyptus grandis
Eucgr.J02065 10.0kb downstream 10.0kb downstream 10000 false Chr10: 25857831-25867830 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062704 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.91687 0.0 22.4123    
cufflinks 5.74346 0.0 18.5232   Low
cufflinks 8.65365 0.0 29.153    
cufflinks 8.40098 0.0 29.6256    
cufflinks 13.1048 0.0 36.7489    
cufflinks 17.3206 0.0 50.9735   High

0 Strain