Gene : Eucgr.L03666 E. grandis v2.0
Defline:  (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1
Name:  ? Eucgr.L03666 Secondary Identifier:  ? PAC:32052362
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03666 0.5kb upstream 0.5kb upstream 1796 true scaffold_4403: 99-1894 Eucalyptus grandis
Eucgr.L03666 0.5kb upstream 0.5kb upstream 500 false scaffold_4403: 1395-1894 Eucalyptus grandis
Eucgr.L03666 0.5kb downstream 0.5kb downstream 1394 true scaffold_4403: 1-1394 Eucalyptus grandis
Eucgr.L03666 0.5kb downstream 0.5kb downstream 98 false scaffold_4403: 1-98 Eucalyptus grandis
Eucgr.L03666 1.0kb upstream 1.0kb upstream 2296 true scaffold_4403: 99-2394 Eucalyptus grandis
Eucgr.L03666 1.0kb upstream 1.0kb upstream 1000 false scaffold_4403: 1395-2394 Eucalyptus grandis
Eucgr.L03666 1.0kb downstream 1.0kb downstream 1394 true scaffold_4403: 1-1394 Eucalyptus grandis
Eucgr.L03666 1.0kb downstream 1.0kb downstream 98 false scaffold_4403: 1-98 Eucalyptus grandis
Eucgr.L03666 2.0kb upstream 2.0kb upstream 3023 true scaffold_4403: 99-3121 Eucalyptus grandis
Eucgr.L03666 2.0kb upstream 2.0kb upstream 1727 false scaffold_4403: 1395-3121 Eucalyptus grandis
Eucgr.L03666 2.0kb downstream 2.0kb downstream 1394 true scaffold_4403: 1-1394 Eucalyptus grandis
Eucgr.L03666 2.0kb downstream 2.0kb downstream 98 false scaffold_4403: 1-98 Eucalyptus grandis
Eucgr.L03666 5.0kb upstream 5.0kb upstream 3023 true scaffold_4403: 99-3121 Eucalyptus grandis
Eucgr.L03666 5.0kb upstream 5.0kb upstream 1727 false scaffold_4403: 1395-3121 Eucalyptus grandis
Eucgr.L03666 5.0kb downstream 5.0kb downstream 1394 true scaffold_4403: 1-1394 Eucalyptus grandis
Eucgr.L03666 5.0kb downstream 5.0kb downstream 98 false scaffold_4403: 1-98 Eucalyptus grandis
Eucgr.L03666 10.0kb upstream 10.0kb upstream 3023 true scaffold_4403: 99-3121 Eucalyptus grandis
Eucgr.L03666 10.0kb upstream 10.0kb upstream 1727 false scaffold_4403: 1395-3121 Eucalyptus grandis
Eucgr.L03666 10.0kb downstream 10.0kb downstream 1394 true scaffold_4403: 1-1394 Eucalyptus grandis
Eucgr.L03666 10.0kb downstream 10.0kb downstream 98 false scaffold_4403: 1-98 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062704 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.53853 0.0 16.3377    
cufflinks 4.35962 0.0 13.1018    
cufflinks 2.24455 0.0 7.43752    
cufflinks 0.805283 0.0 3.05915   Low
cufflinks 4.57559 0.0 13.7895    
cufflinks 0.76022 0.0 2.92634 Low Low

0 Strain