Gene : PAP17 A. thaliana TAIR10
Primary Identifier:  ? AT3G17790 Defline:  (1 of 1) 1.11.1.7//3.1.3.2 - Peroxidase / Lactoperoxidase // Acid phosphatase / Phosphomonoesterase
Genomic Order:  1836 Name:  ? AT3G17790
Secondary Identifier:  ? PAC:19659324
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5083 Arabidopsis thaliana pathologic  
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-6348 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17790 0.5kb upstream 0.5kb upstream 2127 true Chr3: 6089105-6091231 Arabidopsis thaliana
AT3G17790 0.5kb upstream 0.5kb upstream 500 false Chr3: 6089105-6089604 Arabidopsis thaliana
AT3G17790 0.5kb downstream 0.5kb downstream 2127 true Chr3: 6089605-6091731 Arabidopsis thaliana
AT3G17790 0.5kb downstream 0.5kb downstream 500 false Chr3: 6091232-6091731 Arabidopsis thaliana
AT3G17790 1.0kb upstream 1.0kb upstream 2627 true Chr3: 6088605-6091231 Arabidopsis thaliana
AT3G17790 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6088605-6089604 Arabidopsis thaliana
AT3G17790 1.0kb downstream 1.0kb downstream 2627 true Chr3: 6089605-6092231 Arabidopsis thaliana
AT3G17790 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6091232-6092231 Arabidopsis thaliana
AT3G17790 2.0kb upstream 2.0kb upstream 3627 true Chr3: 6087605-6091231 Arabidopsis thaliana
AT3G17790 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6087605-6089604 Arabidopsis thaliana
AT3G17790 2.0kb downstream 2.0kb downstream 3627 true Chr3: 6089605-6093231 Arabidopsis thaliana
AT3G17790 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6091232-6093231 Arabidopsis thaliana
AT3G17790 5.0kb upstream 5.0kb upstream 6627 true Chr3: 6084605-6091231 Arabidopsis thaliana
AT3G17790 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6084605-6089604 Arabidopsis thaliana
AT3G17790 5.0kb downstream 5.0kb downstream 6627 true Chr3: 6089605-6096231 Arabidopsis thaliana
AT3G17790 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6091232-6096231 Arabidopsis thaliana
AT3G17790 10.0kb upstream 10.0kb upstream 11627 true Chr3: 6079605-6091231 Arabidopsis thaliana
AT3G17790 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6079605-6089604 Arabidopsis thaliana
AT3G17790 10.0kb downstream 10.0kb downstream 11627 true Chr3: 6089605-6101231 Arabidopsis thaliana
AT3G17790 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6091232-6101231 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374706 5261 Brassicaceae View MSA
123832279 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.575     High  
cufflinks 19.445        
cufflinks 15.531        
cufflinks 29.391        
cufflinks 31.518     High  
cufflinks 14.043       Low

0 Strain