Gene : CID9 A. thaliana TAIR10
Primary Identifier:  ? AT3G14450 Defline:  (1 of 4) PF00076//PF07145//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6)
Genomic Order:  1470 Name:  ? AT3G14450
Secondary Identifier:  ? PAC:19662541
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14450 0.5kb upstream 0.5kb upstream 2314 true Chr3: 4849288-4851601 Arabidopsis thaliana
AT3G14450 0.5kb upstream 0.5kb upstream 500 false Chr3: 4849288-4849787 Arabidopsis thaliana
AT3G14450 0.5kb downstream 0.5kb downstream 2314 true Chr3: 4849788-4852101 Arabidopsis thaliana
AT3G14450 0.5kb downstream 0.5kb downstream 500 false Chr3: 4851602-4852101 Arabidopsis thaliana
AT3G14450 1.0kb upstream 1.0kb upstream 2814 true Chr3: 4848788-4851601 Arabidopsis thaliana
AT3G14450 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4848788-4849787 Arabidopsis thaliana
AT3G14450 1.0kb downstream 1.0kb downstream 2814 true Chr3: 4849788-4852601 Arabidopsis thaliana
AT3G14450 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4851602-4852601 Arabidopsis thaliana
AT3G14450 2.0kb upstream 2.0kb upstream 3814 true Chr3: 4847788-4851601 Arabidopsis thaliana
AT3G14450 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4847788-4849787 Arabidopsis thaliana
AT3G14450 2.0kb downstream 2.0kb downstream 3814 true Chr3: 4849788-4853601 Arabidopsis thaliana
AT3G14450 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4851602-4853601 Arabidopsis thaliana
AT3G14450 5.0kb upstream 5.0kb upstream 6814 true Chr3: 4844788-4851601 Arabidopsis thaliana
AT3G14450 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4844788-4849787 Arabidopsis thaliana
AT3G14450 5.0kb downstream 5.0kb downstream 6814 true Chr3: 4849788-4856601 Arabidopsis thaliana
AT3G14450 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4851602-4856601 Arabidopsis thaliana
AT3G14450 10.0kb upstream 10.0kb upstream 11814 true Chr3: 4839788-4851601 Arabidopsis thaliana
AT3G14450 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4839788-4849787 Arabidopsis thaliana
AT3G14450 10.0kb downstream 10.0kb downstream 11814 true Chr3: 4849788-4861601 Arabidopsis thaliana
AT3G14450 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4851602-4861601 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372555 5261 Brassicaceae View MSA
123837031 5264 Brassicales-Malvales View MSA
124339957 5266 SBM View MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.117        
cufflinks 0.277     Low  
cufflinks 2.253       High
cufflinks 0.225     Low  
cufflinks 1.968       High
cufflinks 0.205     Low Low

0 Strain