Gene : AT1G43770 A. thaliana TAIR10
Defline:  RING/FYVE/PHD zinc finger superfamily protein Genomic Order:  3634
Name:  ? AT1G43770 Secondary Identifier:  ? PAC:19654897
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G43770 0.5kb upstream 0.5kb upstream 3969 true Chr1: 16547941-16551909 Arabidopsis thaliana
AT1G43770 0.5kb upstream 0.5kb upstream 500 false Chr1: 16547941-16548440 Arabidopsis thaliana
AT1G43770 0.5kb downstream 0.5kb downstream 3969 true Chr1: 16548441-16552409 Arabidopsis thaliana
AT1G43770 0.5kb downstream 0.5kb downstream 500 false Chr1: 16551910-16552409 Arabidopsis thaliana
AT1G43770 1.0kb upstream 1.0kb upstream 4469 true Chr1: 16547441-16551909 Arabidopsis thaliana
AT1G43770 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16547441-16548440 Arabidopsis thaliana
AT1G43770 1.0kb downstream 1.0kb downstream 4469 true Chr1: 16548441-16552909 Arabidopsis thaliana
AT1G43770 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16551910-16552909 Arabidopsis thaliana
AT1G43770 2.0kb upstream 2.0kb upstream 5469 true Chr1: 16546441-16551909 Arabidopsis thaliana
AT1G43770 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16546441-16548440 Arabidopsis thaliana
AT1G43770 2.0kb downstream 2.0kb downstream 5469 true Chr1: 16548441-16553909 Arabidopsis thaliana
AT1G43770 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16551910-16553909 Arabidopsis thaliana
AT1G43770 5.0kb upstream 5.0kb upstream 8469 true Chr1: 16543441-16551909 Arabidopsis thaliana
AT1G43770 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16543441-16548440 Arabidopsis thaliana
AT1G43770 5.0kb downstream 5.0kb downstream 8469 true Chr1: 16548441-16556909 Arabidopsis thaliana
AT1G43770 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16551910-16556909 Arabidopsis thaliana
AT1G43770 10.0kb upstream 10.0kb upstream 13469 true Chr1: 16538441-16551909 Arabidopsis thaliana
AT1G43770 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16538441-16548440 Arabidopsis thaliana
AT1G43770 10.0kb downstream 10.0kb downstream 13469 true Chr1: 16548441-16561909 Arabidopsis thaliana
AT1G43770 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16551910-16561909 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380671 5261 Brassicaceae View MSA
123838696 5264 Brassicales-Malvales View MSA
124338227 5266 SBM View MSA
124251971 5268 Malvidae View MSA
124050819 5270 Rosid View MSA
123744340 5271 Pentapetalae View MSA
122794905 5272 Eudicot View MSA
122051166 5273 Angiosperm View MSA
121312323 5274 Embryophyte View MSA
123349506 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.693        
cufflinks 2.387       High
cufflinks 1.445       Low
cufflinks 2.292       High
cufflinks 1.553        
cufflinks 1.683        

0 Strain