Gene : AT1G18340 A. thaliana TAIR10
Defline:  (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) Genomic Order:  1845
Name:  ? AT1G18340 Secondary Identifier:  ? PAC:19654940
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18340 0.5kb upstream 0.5kb upstream 2949 true Chr1: 6311483-6314431 Arabidopsis thaliana
AT1G18340 0.5kb upstream 0.5kb upstream 500 false Chr1: 6313932-6314431 Arabidopsis thaliana
AT1G18340 0.5kb downstream 0.5kb downstream 2949 true Chr1: 6310983-6313931 Arabidopsis thaliana
AT1G18340 0.5kb downstream 0.5kb downstream 500 false Chr1: 6310983-6311482 Arabidopsis thaliana
AT1G18340 1.0kb upstream 1.0kb upstream 3449 true Chr1: 6311483-6314931 Arabidopsis thaliana
AT1G18340 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6313932-6314931 Arabidopsis thaliana
AT1G18340 1.0kb downstream 1.0kb downstream 3449 true Chr1: 6310483-6313931 Arabidopsis thaliana
AT1G18340 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6310483-6311482 Arabidopsis thaliana
AT1G18340 2.0kb upstream 2.0kb upstream 4449 true Chr1: 6311483-6315931 Arabidopsis thaliana
AT1G18340 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6313932-6315931 Arabidopsis thaliana
AT1G18340 2.0kb downstream 2.0kb downstream 4449 true Chr1: 6309483-6313931 Arabidopsis thaliana
AT1G18340 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6309483-6311482 Arabidopsis thaliana
AT1G18340 5.0kb upstream 5.0kb upstream 7449 true Chr1: 6311483-6318931 Arabidopsis thaliana
AT1G18340 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6313932-6318931 Arabidopsis thaliana
AT1G18340 5.0kb downstream 5.0kb downstream 7449 true Chr1: 6306483-6313931 Arabidopsis thaliana
AT1G18340 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6306483-6311482 Arabidopsis thaliana
AT1G18340 10.0kb upstream 10.0kb upstream 12449 true Chr1: 6311483-6323931 Arabidopsis thaliana
AT1G18340 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6313932-6323931 Arabidopsis thaliana
AT1G18340 10.0kb downstream 10.0kb downstream 12449 true Chr1: 6301483-6313931 Arabidopsis thaliana
AT1G18340 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6301483-6311482 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373735 5261 Brassicaceae View MSA
123833068 5264 Brassicales-Malvales View MSA
124350146 5266 SBM View MSA
124237274 5268 Malvidae View MSA
124067493 5270 Rosid View MSA
123737949 5271 Pentapetalae View MSA
122790317 5272 Eudicot View MSA
122044771 5273 Angiosperm View MSA
121347029 5274 Embryophyte View MSA
123426476 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.533       Low
cufflinks 3.857        
cufflinks 2.933        
cufflinks 4.299       High
cufflinks 2.951        
cufflinks 3.814        

0 Strain