Protein Family : basal transcription factor complex subunit-related 123426476

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  73

73 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29308.t000006 (1 of 1) PTHR12831:SF0 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 3 R. communis v0.1 3256   29308: 51363-54618
Cucsa.178810 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. sativus v1.0 4394   scaffold01227: 1164629-1169022
orange1.1g022374m.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. sinensis v1.1 4189   scaffold00004: 669925-674113
AT1G18340 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) A. thaliana TAIR10 2449   Chr1: 6311483-6313931
Thhalv10008316m.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED E. salsugineum v1.0 2331   scaffold_5: 9202628-9204958
Ciclev10002002m.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. clementina v1.0 4468   scaffold_5: 37270211-37274678
Lus10034501.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED L. usitatissimum v1.0 2696   scaffold310: 1586905-1589600
Gorai.009G245300 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED G. raimondii v2.1 4700   Chr09: 19717248-19721947
estExt_Genewise1.C_20073 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. subellipsoidea C-169 v2.0 2964   scaffold_2: 316597-319560
MicpuC2.estExt_fgenesh1_kg.C_20030 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. pusilla CCMP1545 v3.0 1146   scaffold_2: 849324-850469
EuGene.0100010192 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. sp RCC299 v3.0 1348   Chr_01: 422867-424214
e_gwEuk.1.515.1 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED O. lucimarinus v2.0 975   Chr_1: 358476-359450
Thecc1EG035096 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) T. cacao v1.1 5218   scaffold_8: 6456620-6461837
Migut.D01926 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. guttatus v2.0 4499   scaffold_4: 16923810-16928308
Araha.8671s0001 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED A. halleri v1.1 2364   Scaffold8671: 1013-3376
Cagra.0909s0014 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. grandiflora v1.1 2324   Scaffold909: 39560-41883
Glyma.06G112400 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED G. max Wm82.a2.v1 6405   Chr06: 9119638-9126042
Glyma.04G250400 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED G. max Wm82.a2.v1 5702   Chr04: 51686418-51692119
Brara.F01291 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. rapa FPsc v1.3 2294   A06: 7211663-7213956
Brara.H02425 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. rapa FPsc v1.3 2598   A08: 20422441-20425038
Bostr.7128s0436 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. stricta v1.2 2324   Scaffold7128: 1958734-1961057
Bostr.25993s0473 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. stricta v1.2 2286   Scaffold25993: 2279962-2282247
Cre03.g172050 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) C. reinhardtii v5.6 TFB4 3051   chromosome_3: 4010225-4013275
Medtr3g072430 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. truncatula Mt4.0v1 5764   chr3: 32560390-32566153
SapurV1A.0105s0230 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) S. purpurea v1.0 4504   Scaffold0105: 254455-258958
evm_27.TU.AmTr_v1.0_scaffold00008.222 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED A. trichopoda v1.0 36548   AmTr_v1.0_scaffold00008: 8298779-8335326
Traes_6AS_0F9042D13 (1 of 1) KOG2487 - RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4 T. aestivum v2.2 4508   ta_iwgsc_6as_v1_4404113: 11163-15670
Eucgr.G01112 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED E. grandis v2.0 6768   Chr07: 17007754-17014521
Prupe.1G500100 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED P. persica v2.1 6335   Pp01: 41399896-41406230
GSMUA_Achr7G11830_001 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. acuminata v1 7788   chr7: 9447290-9455077

73 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29308.m000180 R. communis v0.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Cucsa.178810.1 C. sativus v1.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
orange1.1g022374m C. sinensis v1.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
AT1G18340.1 A. thaliana TAIR10 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Thhalv10008316m E. salsugineum v1.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Ciclev10002002m C. clementina v1.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Lus10034501 L. usitatissimum v1.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Gorai.009G245300.1 G. raimondii v2.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
21612 C. subellipsoidea C-169 v2.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
49444 M. pusilla CCMP1545 v3.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
54965 M. sp RCC299 v3.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
39977 O. lucimarinus v2.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Thecc1EG035096t1 T. cacao v1.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Migut.D01926.1.p M. guttatus v2.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Araha.8671s0001.1.p A. halleri v1.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Cagra.0909s0014.1.p C. grandiflora v1.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Glyma.06G112400.1.p G. max Wm82.a2.v1 123426476 basal transcription factor complex subunit-related 2 5275 Viridiplantae
Glyma.04G250400.1.p G. max Wm82.a2.v1 123426476 basal transcription factor complex subunit-related 2 5275 Viridiplantae
Brara.H02425.1.p B. rapa FPsc v1.3 123426476 basal transcription factor complex subunit-related 2 5275 Viridiplantae
Brara.F01291.1.p B. rapa FPsc v1.3 123426476 basal transcription factor complex subunit-related 2 5275 Viridiplantae
Bostr.7128s0436.1.p B. stricta v1.2 123426476 basal transcription factor complex subunit-related 2 5275 Viridiplantae
Bostr.25993s0473.1.p B. stricta v1.2 123426476 basal transcription factor complex subunit-related 2 5275 Viridiplantae
Cre03.g172050.t1.1 C. reinhardtii v5.6 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Medtr3g072430.1 M. truncatula Mt4.0v1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
SapurV1A.0105s0230.1.p S. purpurea v1.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00008.222 A. trichopoda v1.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Traes_6AS_0F9042D13.1 T. aestivum v2.2 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Eucgr.G01112.1.p E. grandis v2.0 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
Prupe.1G500100.1.p P. persica v2.1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae
GSMUA_Achr7P11830_001 M. acuminata v1 123426476 basal transcription factor complex subunit-related 1 5275 Viridiplantae