Gene : Gorai.009G245300 G. raimondii v2.1
Defline:  (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED Genomic Order:  2453
Name:  ? Gorai.009G245300 Secondary Identifier:  ? PAC:26765648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G245300 0.5kb upstream 0.5kb upstream 5200 true Chr09: 19717248-19722447 Gossypium raimondii
Gorai.009G245300 0.5kb upstream 0.5kb upstream 500 false Chr09: 19721948-19722447 Gossypium raimondii
Gorai.009G245300 0.5kb downstream 0.5kb downstream 5200 true Chr09: 19716748-19721947 Gossypium raimondii
Gorai.009G245300 0.5kb downstream 0.5kb downstream 500 false Chr09: 19716748-19717247 Gossypium raimondii
Gorai.009G245300 1.0kb upstream 1.0kb upstream 5700 true Chr09: 19717248-19722947 Gossypium raimondii
Gorai.009G245300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19721948-19722947 Gossypium raimondii
Gorai.009G245300 1.0kb downstream 1.0kb downstream 5700 true Chr09: 19716248-19721947 Gossypium raimondii
Gorai.009G245300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19716248-19717247 Gossypium raimondii
Gorai.009G245300 2.0kb upstream 2.0kb upstream 6700 true Chr09: 19717248-19723947 Gossypium raimondii
Gorai.009G245300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19721948-19723947 Gossypium raimondii
Gorai.009G245300 2.0kb downstream 2.0kb downstream 6700 true Chr09: 19715248-19721947 Gossypium raimondii
Gorai.009G245300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19715248-19717247 Gossypium raimondii
Gorai.009G245300 5.0kb upstream 5.0kb upstream 9700 true Chr09: 19717248-19726947 Gossypium raimondii
Gorai.009G245300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19721948-19726947 Gossypium raimondii
Gorai.009G245300 5.0kb downstream 5.0kb downstream 9700 true Chr09: 19712248-19721947 Gossypium raimondii
Gorai.009G245300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19712248-19717247 Gossypium raimondii
Gorai.009G245300 10.0kb upstream 10.0kb upstream 14700 true Chr09: 19717248-19731947 Gossypium raimondii
Gorai.009G245300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19721948-19731947 Gossypium raimondii
Gorai.009G245300 10.0kb downstream 10.0kb downstream 14700 true Chr09: 19707248-19721947 Gossypium raimondii
Gorai.009G245300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19707248-19717247 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833068 5264 Brassicales-Malvales View MSA
124350146 5266 SBM View MSA
124237274 5268 Malvidae View MSA
124067493 5270 Rosid View MSA
123737949 5271 Pentapetalae View MSA
122790317 5272 Eudicot View MSA
122044771 5273 Angiosperm View MSA
121347029 5274 Embryophyte View MSA
123426476 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain