Protein Family : basal transcription factor complex subunit-related 122790317

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  42

42 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29308.t000006 (1 of 1) PTHR12831:SF0 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 3 R. communis v0.1 3256   29308: 51363-54618
Cucsa.178810 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. sativus v1.0 4394   scaffold01227: 1164629-1169022
orange1.1g022374m.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. sinensis v1.1 4189   scaffold00004: 669925-674113
AT1G18340 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) A. thaliana TAIR10 2449   Chr1: 6311483-6313931
Thhalv10008316m.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED E. salsugineum v1.0 2331   scaffold_5: 9202628-9204958
Ciclev10002002m.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. clementina v1.0 4468   scaffold_5: 37270211-37274678
Lus10034501.g (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED L. usitatissimum v1.0 2696   scaffold310: 1586905-1589600
Gorai.009G245300 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED G. raimondii v2.1 4700   Chr09: 19717248-19721947
Thecc1EG035096 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) T. cacao v1.1 5218   scaffold_8: 6456620-6461837
Migut.D01926 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. guttatus v2.0 4499   scaffold_4: 16923810-16928308
Araha.8671s0001 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED A. halleri v1.1 2364   Scaffold8671: 1013-3376
Cagra.0909s0014 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED C. grandiflora v1.1 2324   Scaffold909: 39560-41883
Glyma.06G112400 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED G. max Wm82.a2.v1 6405   Chr06: 9119638-9126042
Glyma.04G250400 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED G. max Wm82.a2.v1 5702   Chr04: 51686418-51692119
Brara.F01291 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. rapa FPsc v1.3 2294   A06: 7211663-7213956
Brara.H02425 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. rapa FPsc v1.3 2598   A08: 20422441-20425038
Bostr.7128s0436 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED B. stricta v1.2 2324   Scaffold7128: 1958734-1961057
Medtr3g072430 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. truncatula Mt4.0v1 5764   chr3: 32560390-32566153
SapurV1A.0105s0230 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) S. purpurea v1.0 4504   Scaffold0105: 254455-258958
Eucgr.G01112 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED E. grandis v2.0 6768   Chr07: 17007754-17014521
Prupe.1G500100 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED P. persica v2.1 6335   Pp01: 41399896-41406230
Manes.02G162200 (1 of 1) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED M. esculenta v6.1 5840   Chromosome02: 12275987-12281826
Kalax.0142s0068 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED K. laxiflora v1.1 6178   scaffold_142: 480531-486708
Kalax.0241s0011 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED K. laxiflora v1.1 5558   scaffold_241: 67710-73267
Aqcoe7G273500 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED A. coerulea v3.1 22548   Chr_07: 28339676-28362223
Aqcoe6G168700 (1 of 2) PTHR12831 - TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED A. coerulea v3.1 13725   Chr_06: 10203616-10217340
Kaladp0076s0322 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) K. fedtschenkoi v1.1 6271   Scaffold_76: 2937524-2943794
AL1G30720 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) A. lyrata v2.1 2399   scaffold_1: 7699367-7701765
DCAR_017415 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) D. carota v2.0 4372   DCARv2_Chr5: 17629510-17633881
Solyc06g071450.2 (1 of 1) K03143 - transcription initiation factor TFIIH subunit 3 (TFIIH3, GTF2H3, TFB4) S. lycopersicum ITAG2.4 5340   SL2.50ch06: 43959261-43964600

42 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29308.m000180 R. communis v0.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Gorai.009G245300.1 G. raimondii v2.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Thecc1EG035096t1 T. cacao v1.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Migut.D01926.1.p M. guttatus v2.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Brara.H02425.1.p B. rapa FPsc v1.3 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
SapurV1A.0105s0230.1.p S. purpurea v1.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Eucgr.G01112.1.p E. grandis v2.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Manes.02G162200.1.p M. esculenta v6.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Kalax.0241s0011.1.p K. laxiflora v1.1 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
Kalax.0142s0068.1.p K. laxiflora v1.1 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
Aqcoe6G168700.1.p A. coerulea v3.1 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
Aqcoe7G273500.1.p A. coerulea v3.1 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
Kaladp0076s0322.1.p K. fedtschenkoi v1.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Solyc06g071450.2.1 S. lycopersicum ITAG2.4 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Potri.005G176600.1.p P. trichocarpa v3.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
PGSC0003DMP400046876 S. tuberosum v4.03 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Oeu024691.1 O. europaea v1.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Lsat_1_v5_gn_3_69700.1 L. sativa V8 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
HanXRQChr16g0532671 H. annuus r1.2 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
HanXRQChr02g0053121 H. annuus r1.2 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
Cucsa.178810.1 C. sativus v1.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
orange1.1g022374m C. sinensis v1.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
AT1G18340.1 A. thaliana TAIR10 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Thhalv10008316m E. salsugineum v1.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Ciclev10002002m C. clementina v1.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Lus10034501 L. usitatissimum v1.0 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Araha.8671s0001.1.p A. halleri v1.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Cagra.0909s0014.1.p C. grandiflora v1.1 122790317 basal transcription factor complex subunit-related 1 5272 Eudicot
Glyma.06G112400.1.p G. max Wm82.a2.v1 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot
Glyma.04G250400.1.p G. max Wm82.a2.v1 122790317 basal transcription factor complex subunit-related 2 5272 Eudicot