Gene : Bradi5g14590 B. distachyon v3.1
Defline:  (1 of 1) K11090 - lupus La protein (LA, SSB) Genomic Order:  1631
Name:  ? Bradi5g14590 Secondary Identifier:  ? PAC:32808682
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g14590 0.5kb upstream 0.5kb upstream 7876 true Bd5: 18182489-18190364 Brachypodium distachyon
Bradi5g14590 0.5kb upstream 0.5kb upstream 500 false Bd5: 18189865-18190364 Brachypodium distachyon
Bradi5g14590 0.5kb downstream 0.5kb downstream 7876 true Bd5: 18181989-18189864 Brachypodium distachyon
Bradi5g14590 0.5kb downstream 0.5kb downstream 500 false Bd5: 18181989-18182488 Brachypodium distachyon
Bradi5g14590 1.0kb upstream 1.0kb upstream 8376 true Bd5: 18182489-18190864 Brachypodium distachyon
Bradi5g14590 1.0kb upstream 1.0kb upstream 1000 false Bd5: 18189865-18190864 Brachypodium distachyon
Bradi5g14590 1.0kb downstream 1.0kb downstream 8376 true Bd5: 18181489-18189864 Brachypodium distachyon
Bradi5g14590 1.0kb downstream 1.0kb downstream 1000 false Bd5: 18181489-18182488 Brachypodium distachyon
Bradi5g14590 2.0kb upstream 2.0kb upstream 9376 true Bd5: 18182489-18191864 Brachypodium distachyon
Bradi5g14590 2.0kb upstream 2.0kb upstream 2000 false Bd5: 18189865-18191864 Brachypodium distachyon
Bradi5g14590 2.0kb downstream 2.0kb downstream 9376 true Bd5: 18180489-18189864 Brachypodium distachyon
Bradi5g14590 2.0kb downstream 2.0kb downstream 2000 false Bd5: 18180489-18182488 Brachypodium distachyon
Bradi5g14590 5.0kb upstream 5.0kb upstream 12376 true Bd5: 18182489-18194864 Brachypodium distachyon
Bradi5g14590 5.0kb upstream 5.0kb upstream 5000 false Bd5: 18189865-18194864 Brachypodium distachyon
Bradi5g14590 5.0kb downstream 5.0kb downstream 12376 true Bd5: 18177489-18189864 Brachypodium distachyon
Bradi5g14590 5.0kb downstream 5.0kb downstream 5000 false Bd5: 18177489-18182488 Brachypodium distachyon
Bradi5g14590 10.0kb upstream 10.0kb upstream 17376 true Bd5: 18182489-18199864 Brachypodium distachyon
Bradi5g14590 10.0kb upstream 10.0kb upstream 10000 false Bd5: 18189865-18199864 Brachypodium distachyon
Bradi5g14590 10.0kb downstream 10.0kb downstream 17376 true Bd5: 18172489-18189864 Brachypodium distachyon
Bradi5g14590 10.0kb downstream 10.0kb downstream 10000 false Bd5: 18172489-18182488 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
124572104 5269 Grass View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.166        
cufflinks 4.595        
cufflinks 3.661        
cufflinks 4.079        
cufflinks 1.923        
cufflinks 3.92        
cufflinks 3.935        
cufflinks 3.115        
cufflinks 3.254        
cufflinks 1.97        
cufflinks 1.389       Low
cufflinks 2.996        
cufflinks 0.785       Low
cufflinks 1.004       Low
cufflinks 1.64        
cufflinks 4.144        
cufflinks 3.781        
cufflinks 9.073       High
cufflinks 2.751        
cufflinks 0.586       Low
cufflinks 2.884        
cufflinks 2.677        
cufflinks 2.67        
cufflinks 3.104        
cufflinks 4.098        
cufflinks 2.463        
cufflinks 1.143       Low
cufflinks 2.144        
cufflinks 1.893        
cufflinks 4.011        

0 Strain